Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1757 ATGTCTTCTCCAGTGATAAGCGAGATCCTCCTCTCTGGCTTCACCATAAACTCTTCCCTAAGACGCAGGACACACTTGGTTCAATCTTTCTCAGTTGCCTTCCTCCACTGGTTCTATCAAATCAGAATTTTTATTACTACATACATGGCTTCTCCCGGTGGAAGTGGAAGTGGAACCTATTCATCCGGTTGCAGTTCTCTTCAAAACTCAGGGTCGGAGGGAGGAGGAGGAGGAGACAGAGACATGGTGGAACAGAGGAAGAGGAAGAGAATGCTGTCCAATAGGGAATCGGCGCGCCGATCAAGGATGAGGAAACAGCAACACGTGGAAGGACTGAGCAGCCAGCTGGATCAGCTGAAAAAGGAGAACACGCAAATCAACACGAACATAGGCATCACGACGCAGCTTTTCGTGAACGTGGAAGCAGAGAATGCGATTCTGAGGGCTCAGATGGCGGAACTGAGCAACAGATTGAACTCTCTCAACGAAATCAATAGTTTCATTAACACCACCAACTGCTTGATGTTCGATGAGGCACAGGAGACTCAATTGTTCAATGATTGTGGCTTCATGGATGCTTGGAATGGAAACGGAATACCAATCATGGCTTCCGCTGAAAATGACATGTTGATCATGTATTGA 642 0.4704 MSSPVISEILLSGFTINSSLRRRTHLVQSFSVAFLHWFYQIRIFITTYMASPGGSGSGTYSSGCSSLQNSGSEGGGGGDRDMVEQRKRKRMLSNRESARRSRMRKQQHVEGLSSQLDQLKKENTQINTNIGITTQLFVNVEAENAILRAQMAELSNRLNSLNEINSFINTTNCLMFDEAQETQLFNDCGFMDAWNGNGIPIMASAENDMLIMY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1757 213 Coils Coil 137 164 - -
Aed5g1757 213 MobiDBLite consensus disorder prediction 59 114 - -
Aed5g1757 213 Gene3D - 84 137 - -
Aed5g1757 213 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
Aed5g1757 213 PANTHER BZIP TRANSCRIPTION FACTOR 44 49 209 - -
Aed5g1757 213 Coils Coil 102 129 - -
Aed5g1757 213 MobiDBLite consensus disorder prediction 79 107 - -
Aed5g1757 213 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 49 209 - -
Aed5g1757 213 SUPERFAMILY Leucine zipper domain 86 138 IPR046347 GO:0003700|GO:0006355
Aed5g1757 213 Pfam bZIP transcription factor 85 130 IPR004827 GO:0003700|GO:0006355
Aed5g1757 213 MobiDBLite consensus disorder prediction 59 73 - -
Aed5g1757 213 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Aed5g1757 213 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 130 IPR004827 GO:0003700|GO:0006355
Aed5g1757 213 CDD bZIP_plant_GBF1 87 137 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1757 Aed-Chr5 21257618 21258407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1757 82 171 bZIP Transcription Factor Family AT4G34590 60.000 2.45e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed5g1757 bZIP_1 8.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1757 K25786 - gmx:778140 214.927