Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1742 ATGGCTGATAGTCATGAGAAGTTTGGATTTATCGTGATGGATGGGAATGGTGCCTTGTTTGGGACTTTGAGTGGTAATACAAGAGAGGTGCTACATAAATTCAATGCGGATCTCCCAAAGAAACATGATAGAGGAATGCAATCAGCTCTACGTTTCGCCCGTCTTCGCATGGAGAAGCATGATAACTACATGAGGATGACGGCAGAGCTTGCCACCCAGCTCTATATCAATCCTACCACCAACCAACCCAATGTTTCTGGATTAATACTGGCGGGTTCAGATGATTTCAAAAGTAGTCAATCATATTGGCTTGATCCTCTACTTGAGGAGAAAATACTCAATGTTGTTGATGTTTCCGATGGAGGCGAGAATGGGTTTAACCAGGCTATTGAACTATCCGCTGAAATTCTGTCCAAAAGAATCGAAGACTAG 432 0.4306 MADSHEKFGFIVMDGNGALFGTLSGNTREVLHKFNADLPKKHDRGMQSALRFARLRMEKHDNYMRMTAELATQLYINPTTNQPNVSGLILAGSDDFKSSQSYWLDPLLEEKILNVVDVSDGGENGFNQAIELSAEILSKRIED 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1742 143 SUPERFAMILY Translational machinery components 6 137 - -
Aed5g1742 143 PANTHER EUKARYOTIC RELEASE FACTOR 1-3-RELATED 3 139 - -
Aed5g1742 143 Pfam eRF1 domain 2 7 138 IPR005141 -
Aed5g1742 143 Gene3D eRF1 domain 2 1 138 IPR042226 -
Aed5g1742 143 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 3 139 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1742 Aed-Chr5 21174576 21175007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1742 1 138 Eukaryotic Initiation Factors Gene Family AT1G12920 80.000 4.36e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1742 K03265 - sspl:121782523 216.468