Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1735 ATGGATTCGGTGCCTTCGAATTCGCATGGAAACCTCGATGAGCAGATTTCTCAGCTCATGCAGTGCAAACCCTTGTCCGAACAAGAGGTAAGGGTCTTGTGTGATAAGGCAAAAGAAATTTTGATGGAAGAGAGCAACGTTCAGCCTGTGAAAAGTCCTGTTACAATTTGTGGTGATATTCATGGGCAATTCCATGACCTTGCAGAGCTTTTTCGCATTGGAGGAAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTATGTGGACCGTGGCTACTATTCTGTCGAAACTGTTACGATTACTCAAGTTTATGGGTTTTATGATGAGTGTCTGCGGAAGTATGGTAGTGCTAATGTTTGGAAGATCTTTACCGATTTGTTTGACTACTTTCCATTGACAGCATTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGGTTGTCACCATCTATTGAAACCCTGGATAACATACGTAATTTTGATCGCGTACAAGAAGTTCCTCACGAGGGACCCATGTGTGATCTTCTATGGTCGGATCCGGATGATCGTTGTGGTTGGGGCATCTCTCCTAGAGGTGCTGGATATACCTTTGGCCAGGACATATCTGAGCAATTTAACCATACCAATAACTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGACATGATCAAAAGGTGGTTACCATATTTAGTGCACCTAACTATTGTTATCGTTGCGGGAACATGGCATCAATTCTTGAGGTCGATGACTGCAAGGGACACACATTCATTCAGTTTGAGCCAGCTCCAAGGAGGGGAGAGCCAGATGTAACCAGGAGAACGCCTGATTACTTCCTATGA 864 0.4352 MDSVPSNSHGNLDEQISQLMQCKPLSEQEVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1735 287 SMART pp2a_7 25 271 IPR006186 GO:0016787
Aed5g1735 287 Pfam Calcineurin-like phosphoesterase 53 220 IPR004843 GO:0016787
Aed5g1735 287 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 101 287 - -
Aed5g1735 287 CDD MPP_PP2A_PP4_PP6 11 271 - -
Aed5g1735 287 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-5 CATALYTIC SUBUNIT 5 101 - -
Aed5g1735 287 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-5 CATALYTIC SUBUNIT 101 287 - -
Aed5g1735 287 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 101 - -
Aed5g1735 287 PRINTS Serine/threonine phosphatase family signature 53 80 IPR006186 GO:0016787
Aed5g1735 287 PRINTS Serine/threonine phosphatase family signature 233 249 IPR006186 GO:0016787
Aed5g1735 287 PRINTS Serine/threonine phosphatase family signature 82 109 IPR006186 GO:0016787
Aed5g1735 287 PRINTS Serine/threonine phosphatase family signature 211 231 IPR006186 GO:0016787
Aed5g1735 287 Gene3D - 5 287 IPR029052 -
Aed5g1735 287 SUPERFAMILY Metallo-dependent phosphatases 10 272 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1735 Aed-Chr5 21124651 21131440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1735 17 217 Calmodulin-binding Proteins AT5G63870 29.963 1.88e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1735 K04382 - gmx:100782279 598.586