Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1717 ATGAATCTTAATGCAAATGAGACTTTGTTCTTGTCAATTGATCAAATCAATTATGTAAGCTATAATGTGTGCACTGTTGCTCCACCCAATATTGTTTCAGATGGCATATGGGGTGGCCACTTTAATGGCAGGACTCCAATGAAATCTTCACTACCATTGTTTGAGTTGCAAGTGCTTACAATTTTTGCTATCACACAAATCTGCCAATTCCTCTTAAAGAGCTTTGATTTCCCTGAATTTATTCCACAAATGATAGCTGGTCTGATTCTAGGTCCTGCTATTCAGGTAGAGATGCTTAACACATACAAGATGAAGTTGTTTCCATATCCAAGTCAGGACACACTTGCAACAATAACATCAATTGGTTATGCACTTTTCATCTTTACAAGTGGTGTGCAAATGGATTTGAGCATGGTAACCAGGACAGGACACAGGGCATGGATCATAACTATTATTGGATTGGTTGTGCCAATACTTGTTTGCATTCCAACCATAATCAACGTTGAGCGTTTATGCCTTCACTTTGAATATGAAATCTTCAATGTTACTCCTGTAGTGCTATCAGAAACTGTGAATTCATTTGCAGTAGTTGCTTGCCTCCTCAATGAACTTAAAATCCTGAACTCTGAACTTGGCAGATTGGCATTATCCTCGGCATTGGTGAGCGACATATTGAGCAAAACCATTTTGTGTTTTACCAGTATCTTTATTGATACCAATGAAAACCATAATGTTTTTGTGCTCATGGGATCATTGGTTGCTTTTGGCATCTTTGTTCCGTTGTTTTTCCGCCCGGCAATGTTTTGGATCATCAAACGTACCCCAGAAGGAAGGCCTGTGAATGAAAGTTATGTCTATATTGTCATCACATTGGTCTTTGCATTAGGTTGGGTTGTAGTTCAAATAAATCAAGACTTCATCTTAGGAGCTTTTGTTTTGGGGTTGGCTGTGCCAGAAGGGCCTCCATTAGGTTCTGCATTGGTCAAGAAGCTTCACTTCTTTGGTAACTGTTTCTTCTTGCCAATATTTATCACTTGCAGTGTGATGAAGGCTGATTTTTCCAAGGACTTCTCATCAAAAGGAGTTATGATCACTGCTTTCATCTCTCTTTTCACTCACTTTGTCAAAGTAATAGCATGCGCTATACCCGCCATCTTTTGCAAGATTCCCTTCAAAGATGCCTTTACTCTTGGCATCATTTTGAACGTTAAAGGTGTAGTTGAAGTTGGCGGCTATGGTATCTTATATGATGAAGGGACTATTAGTGGCCATACTTATGGAATAATGATGATTAGCATAATGGTGGTAGCAAGCATAGTGAAATGGTCTGTGAAACTATTGTATGATCCATCTAGAAAATACGCAGGCTACCAGAAAAGGAACATAGAGAATTTAAAACAAGAGTCAGAGCTGAGAATAGTTGCTTGCGTTTACAAAAGACACCATGTATCTGCTGTAAAAGATTTCATTGACCTCTGCTGTCCAACAACAGAATACCCCGTCATTGTGAACGCATTGCATCTGATCGAGCTAGTTGGAAGGTCCTCTCCCATTTTCATTTCACACCGCATTCAAAGAACGACTTCATTAAACGGTCACAAGTCTTATTCAGATGATGTGATTCTTGCTTTTGATCTCTATGAACATGACAACATTGGTGCAGTAACTGCACACACTTACACAGCCATATCTCCACCATCACTCATGCATGAGGATGTTTGTCATCTAGCATTGGACAAAGTGGCATCCATTATAATTCTTCCATTCCATCTAAGATGGTCTAGTGATGGTGCCATAGAATCTGATGACAAGAATGCAAGGGCCTTAAATATTAAGCTCCTAGATATAGCTCCATGCTCAATTGGAATCCTTGTAGGCCGTTCTTCCATTTGTAGTAACGAATCGTTTATTCGGATAGCAATGATTTTCCTTGGAGGAAAAGATGATCGAGAGGCATTGTGCTTAGCCACACGAGCAACGAGGAATCCAATGGTAAACTTGTCAGTGTACCACCTTGCTCCTAAGGAACAGACACCAGATATGGAGTATATACGAGACAATGTGGCACTAAAACATGTTAAGAAACCAGAGTTGAGAAATGTGAGTTATGAGAGAGTTGTGGTGGATGGTGGACAAGAGACATCTCTTCTTCTTCGCCAAATAGTAGGTCAACATCATTTCTTCATAGTTGGAAGAAGACATGAGTTAGACTCACCTCAGACGGATGGACTTACAACTTGGAGTGAGTTTTCAGAGTTAGGTGTCATTGGTGATTTGCTTGCTTCTGCAGATTTTGAAAGCAGAGCGTGTGTTTTGGTAGTGCAGCAACAAGTCAAAGAAACATCAGATTAG 2352 0.3992 MNLNANETLFLSIDQINYVSYNVCTVAPPNIVSDGIWGGHFNGRTPMKSSLPLFELQVLTIFAITQICQFLLKSFDFPEFIPQMIAGLILGPAIQVEMLNTYKMKLFPYPSQDTLATITSIGYALFIFTSGVQMDLSMVTRTGHRAWIITIIGLVVPILVCIPTIINVERLCLHFEYEIFNVTPVVLSETVNSFAVVACLLNELKILNSELGRLALSSALVSDILSKTILCFTSIFIDTNENHNVFVLMGSLVAFGIFVPLFFRPAMFWIIKRTPEGRPVNESYVYIVITLVFALGWVVVQINQDFILGAFVLGLAVPEGPPLGSALVKKLHFFGNCFFLPIFITCSVMKADFSKDFSSKGVMITAFISLFTHFVKVIACAIPAIFCKIPFKDAFTLGIILNVKGVVEVGGYGILYDEGTISGHTYGIMMISIMVVASIVKWSVKLLYDPSRKYAGYQKRNIENLKQESELRIVACVYKRHHVSAVKDFIDLCCPTTEYPVIVNALHLIELVGRSSPIFISHRIQRTTSLNGHKSYSDDVILAFDLYEHDNIGAVTAHTYTAISPPSLMHEDVCHLALDKVASIIILPFHLRWSSDGAIESDDKNARALNIKLLDIAPCSIGILVGRSSICSNESFIRIAMIFLGGKDDREALCLATRATRNPMVNLSVYHLAPKEQTPDMEYIRDNVALKHVKKPELRNVSYERVVVDGGQETSLLLRQIVGQHHFFIVGRRHELDSPQTDGLTTWSEFSELGVIGDLLASADFESRACVLVVQQQVKETSD 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1717 783 PANTHER CATION/H + ANTIPORTER 13 780 - -
Aed5g1717 783 Pfam Sodium/hydrogen exchanger family 61 438 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed5g1717 783 Gene3D - 54 455 IPR038770 -
Aed5g1717 783 PANTHER EXCHANGER, PUTATIVE-RELATED 13 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1717 Aed-Chr5 21003897 21006836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1717 23 777 Antiporter Super Family AT5G22900 36.996 4.46e-161 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1717 - - gmx:100797995 1318.52