Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1710 ATGACTTTGGTGGAGTTTCTTGATCTGAACCTTTTGAGTACGCCGCCCCCTCAGTCGCGTTATGTTCTCGATTCCGAGAACAAATTAAATGACCAGTGGGCAAATCCTGCGGCCACTCAACTTGTTTCTTTAACGGCGGATCCCATGACCTGCATTGAGTCGGATCACATTATTCCAGTTCACGTGCGGATAAAGAATTGTGAAGGTGACAGTGATAATGGTGACAATGGTGTAAGTTACGTTCCAGCTGACATGTTGTCAATAAAGAACTATGATAGTGACAATGATGTAGGTCATATTCCAGTGATAAAGAACTGTGACGGTGATAGTAATGATGGCAGTGATGCGGGTCACGTTCTAATTGATGGTGAAAGTAATGATGGTAACAGTAATGTGGGTCATGTTCCAATTGAAATGTTGATAAAGAACCATGATAGTGTCAATGATAATGGTGATATTCCACGCAACAAGAAGAAAGGCAGAGGAAAAACATGGACGGAAGAAGAACACTCGTTATTTCTGATTGGACTTGATAAATATGGTAAAGGAGATTGGAAAAATATTTCAAGATATATTCAAACAAGAAGTTCAATACAGGTTGCTAGTCATGCACAAAAATACTTCATTCGCCAAAAAGTCGAAAGAAAGAAAAGAAGAAGTATCCATGACAGAGCTTTAGAAGACACAGATGTGATTTCTGAGTGCATTGACCCCCAAAATTTGACTCCTCCTCTAAGTCCTACTGTTGAACAATCACATAAAATACAACAGAAAATAGTGTCACAGTTGAATCCACCAAATAGCAGTGCTAATCCAATTAAGAGACTAAGAGTAATAGATTATTATTTTTAG 852 0.3862 MTLVEFLDLNLLSTPPPQSRYVLDSENKLNDQWANPAATQLVSLTADPMTCIESDHIIPVHVRIKNCEGDSDNGDNGVSYVPADMLSIKNYDSDNDVGHIPVIKNCDGDSNDGSDAGHVLIDGESNDGNSNVGHVPIEMLIKNHDSVNDNGDIPRNKKKGRGKTWTEEEHSLFLIGLDKYGKGDWKNISRYIQTRSSIQVASHAQKYFIRQKVERKKRRSIHDRALEDTDVISECIDPQNLTPPLSPTVEQSHKIQQKIVSQLNPPNSSANPIKRLRVIDYYF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1710 283 MobiDBLite consensus disorder prediction 145 164 - -
Aed5g1710 283 SMART sant 161 210 IPR001005 -
Aed5g1710 283 MobiDBLite consensus disorder prediction 148 164 - -
Aed5g1710 283 Pfam Myb-like DNA-binding domain 163 208 IPR001005 -
Aed5g1710 283 ProSiteProfiles SANT domain profile. 160 212 IPR017884 -
Aed5g1710 283 CDD SANT 164 208 IPR001005 -
Aed5g1710 283 Gene3D - 163 213 - -
Aed5g1710 283 ProSiteProfiles Myb-like domain profile. 157 208 IPR001005 -
Aed5g1710 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 212 IPR017930 -
Aed5g1710 283 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 131 234 - -
Aed5g1710 283 SUPERFAMILY Homeodomain-like 161 212 IPR009057 -
Aed5g1710 283 PANTHER TRANSCRIPTION FACTOR KUA1 131 234 - -
Aed5g1710 283 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 164 211 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1710 Aed-Chr5 20924349 20926177 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed5g1710 Myb_DNA-binding 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1710 - - dzi:111294518 105.916