Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1705 ATGCGTTGTTATGGCGAGAATCGGTTCTGCGTCCCCACCGTATCTCCGGCGTTCCCTCGGCCCAGCAGGCCCATTGGCCGAATCGCGTTTCCCAAGGCGACGCTGAAGAACGCGGGGGCCTTCGTGGTGGACCTGAGTTTCTACGAGCTTCTGGGAATACCCGAATCGGGTTCGTTAACGGAGATCAAGAGCGCGTACAAGCAACTCGCCCGAAAGTACCACCCGGACGTGTCCCCACCGGGTCGGGTCGAGGAGTACACAAAGAGGTTTATTCAGGTGCAGGAGGCCTACGAAACCTTATCTGATCCTTCCACGAGAGCCATGTACGACAAGGACATGGCCAAGGGCATTCACTTCGCCTTCAACGCTCGCAGACGCTCTAATTACCACGATCAGGTGGTTGAACAAAAAAGTGAATGGAAATCGCGGTGGCAATCTCAGCTGTCAGAGCTGAAGAGAAGAAGTAACAGCAGCAACGATGGTGGAGGGAATATGTCATGGGCAGCACGAATGCGCCAGCAGAGGGATGAAGTGTCAAATGAATCATCATGA 552 0.5453 MRCYGENRFCVPTVSPAFPRPSRPIGRIAFPKATLKNAGAFVVDLSFYELLGIPESGSLTEIKSAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSTRAMYDKDMAKGIHFAFNARRRSNYHDQVVEQKSEWKSRWQSQLSELKRRSNSSNDGGGNMSWAARMRQQRDEVSNESS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1705 183 MobiDBLite consensus disorder prediction 145 164 - -
Aed5g1705 183 Pfam DnaJ domain 47 110 IPR001623 -
Aed5g1705 183 SUPERFAMILY Chaperone J-domain 46 117 IPR036869 -
Aed5g1705 183 PRINTS DnaJ domain signature 85 105 IPR001623 -
Aed5g1705 183 PRINTS DnaJ domain signature 48 66 IPR001623 -
Aed5g1705 183 PRINTS DnaJ domain signature 66 81 IPR001623 -
Aed5g1705 183 ProSiteProfiles dnaJ domain profile. 46 113 IPR001623 -
Aed5g1705 183 MobiDBLite consensus disorder prediction 145 183 - -
Aed5g1705 183 ProSitePatterns Nt-dnaJ domain signature. 90 109 IPR018253 -
Aed5g1705 183 CDD DnaJ 47 102 IPR001623 -
Aed5g1705 183 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 42 179 - -
Aed5g1705 183 SMART dnaj_3 45 105 IPR001623 -
Aed5g1705 183 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 42 179 - -
Aed5g1705 183 Gene3D DnaJ domain 44 177 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1705 Aed-Chr5 20869110 20872254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1705 48 110 C2H2 Transcription Factor Family AT1G74250 46.970 1.60e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1705 - - gmx:100101903 304.293