Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1674 ATGTCTCTCTCGAAACCCCTTCTACTCTGTTTCTCCTTTCTCTTGATCACCACCGTAGTAAGCGGCGATGACACGGCGGTGATGTATGAATTCCAGAAATCGGTGACTCCAGCGCCGCCCGGGTGGTCGAAAGCTAGCCCAGTCTGCAAATGGAATGGAGTAAAATGCGATTCATTGAACCGGGTGAGCAGCATAAACCTGGATTCACAGTCCCTCACCGGAACACTTCCCGCGGATCTCAATTCCCTGACGCAACTCCAGACTCTCTTCCTCCAAAACAATTCCCTCTCCGGCACCATCCCTTCCCTCTCCAAACTCTCATTCCTCAAAACCGCGTACCTCAGCAACAACAAATTCACCTCCGTGGCCCCCACCGCCTTCGCCTCCCTAACCTCCCTCCAAAACCTCAGCCTCGCTTACAACCCTACCCTCCAACCCTGGACATTCCCCACCGACCTCGCCTCTTCCTCCGTTAACCTACTGGACCTCACCCAAACAAGCCTCACCGGTCCCCTACCAGACATTTTCGACAAACTTCCCTCTCTTAAACACCTTCTCCTCGCCTACAACAACTTCACCGGCGTTTTGCCCTCCTCTTTCGCCTCCTCCAATATCGAAACCCTCTGGCTCAACAACCAGGCCACCGACTTGTCCGGTACCCTCCACGTCATCTCCAACATGACACAGTTAAAACAGGCCTGGCTCAATGATAACCACTTCACCGGTCCGATACCCGATTTGTCGCAATGCAAGGGCTTGTATGAATTGCGCCTCCGGGATAACCAGTTAACCGGCGTGGTTCCCGCTTCCCTCACGAGTCTTCCGAGTTTGAAGAATGTTACGCTCGATAACAACAAGCTTCAGGGGCCTGTGCCCGTGTTTAGGGATGGTGTGGGTGTCACTCTCGCTGGGACCAATAGCTTTTGTCTCGACCCTCCTGCTGCTGGGAAATGTGATCCCAGGGTCATGGTTTTGCTTCAGATTGCTGAGGCCTTCGGCTATCCCATTCAGTTGTCGGATTCGTGGAAGGGGAATGACCCTTGTGTTGATTGGAACTTTGTTGTGTGTGCTCAAGGGAAGATTATTACTGTCAATTTCGCCAAGCAGGGTTTTCAGGGTACCATCTCCCCTGCATTTTCCAATTTGACTGACTTGACCAGATTGTTTCTCAATGGGAATAACTTGACCGGTTCTATACCTGCTACTTTGACCACTTTGTCTCAGCTTCAGACTCTTGATGTGTCTGATAACAACCTCTCCGGAGAGCTTCCTAAGTTCCCACCCAAGGTGAAGTTAGTCACTGCGGGGAATCCTTTGCTTGGGAAGCCTCTTAGTCCCGGAGGTGGACCAAGTGGAACCACTCCTTCGGGGCCTTCAACTGCCGGGGGTGGTGCTGAATCTGCAAAGGGTAGTTCTTCCCTGTCACTGGGTTGGATTGCTGGTATAGTTGTTATTGTATTGTTCTTTATTGCTGTGGTGTTGTTTGTGTCTTTCAAGTGTTATGTCAACAAGCGGCGGGGGGAGTTCAGTATGATTAATGGCCGTGATAATGGGAAAGGAAACTTTAAACCCGATGCTGTCATCAATGTTTCTAGTGGATATGGTGGTGTTGCCAGTGAGTTGCAAAGCCATAGCAGTGGTGATCGCAGTGACCTTCATGGATATGGTGGTGATGGTGCAACGTTTTCGATCCAACTTCTTCGACAAGTGACGAATAATTTCAGCGAGGATAACATTTTAGGCAGGGGAGGGTTTGGAGTGGTTTATAAGGGGGAGTTGCATGATGGAACCAAAATTGCTGTCAAGAGGATGGAATCTGTTGCGATGGGAAACAAAGGACTGAAGGAGTTCGAAGCAGAGATTGCAGTTCTTAGTAAAGTTAGGCATAGACATTTGGTTGCTCTTTTAGGGTATTGCATCAATGGCAATGAAAGGATTTTGGTGTATGAGTATATGCCTCAAGGTACACTAACACAGCACCTCTTTGAGTGGCAGGAGCATGGGTACGCTCCTTTGACTTGGAAACAAAGGGTAGTAATAGCTTTGGATGTAGCTCGGGGGGTGGAATACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCATAGAGACTTAAAACCCTCAAACATACTACTAGGGGATGACATGAGAGCAAAGGTAGCAGATTTTGGGTTGGTTAAAAATGCTCCAGATGGGAAGTATTCTGTTGAGACACGGTTGGCTGGAACATTTGGATATCTTGCACCTGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGAGTAGTTTTGATGGAACTTATCACCGGTACAAGGGCATTGGATGATAGTGTGCCAGATGAAAGGTCTCACTTGGTTACATGGTTCCGTAGGGTACTAATTAACAAGGAAAACATTCCAAAGGCAATTGATCAAATTCTGAATCCGGATGAGGAAACCATGGATAGCATATATAAAGTGGCTGAGCTAGCAGGGCATTGCACTGCTCGTGAACCATACCAAAGGCCGGATATGGGTCATTCGGTGAACGTCTTGGTTCCTCTTGTGGAGCAATGGAAACCTACTAGCCATGAGGAGGAACAAGAGGACCTTCAAATGAGCCTTCCTCAAGCTTTACGAAGGTGGCAAGCCAATGAAGGCACTTCCTCAATTTTTAATGACATCTCCATCTCACAAACCCAATCAAGCATCCCCTGTAAACCTGCAGGATTTGCAAACTCCTTTGATTCGATGGATTGCAGATAA 2760 0.4833 MSLSKPLLLCFSFLLITTVVSGDDTAVMYEFQKSVTPAPPGWSKASPVCKWNGVKCDSLNRVSSINLDSQSLTGTLPADLNSLTQLQTLFLQNNSLSGTIPSLSKLSFLKTAYLSNNKFTSVAPTAFASLTSLQNLSLAYNPTLQPWTFPTDLASSSVNLLDLTQTSLTGPLPDIFDKLPSLKHLLLAYNNFTGVLPSSFASSNIETLWLNNQATDLSGTLHVISNMTQLKQAWLNDNHFTGPIPDLSQCKGLYELRLRDNQLTGVVPASLTSLPSLKNVTLDNNKLQGPVPVFRDGVGVTLAGTNSFCLDPPAAGKCDPRVMVLLQIAEAFGYPIQLSDSWKGNDPCVDWNFVVCAQGKIITVNFAKQGFQGTISPAFSNLTDLTRLFLNGNNLTGSIPATLTTLSQLQTLDVSDNNLSGELPKFPPKVKLVTAGNPLLGKPLSPGGGPSGTTPSGPSTAGGGAESAKGSSSLSLGWIAGIVVIVLFFIAVVLFVSFKCYVNKRRGEFSMINGRDNGKGNFKPDAVINVSSGYGGVASELQSHSSGDRSDLHGYGGDGATFSIQLLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGNKGLKEFEAEIAVLSKVRHRHLVALLGYCINGNERILVYEYMPQGTLTQHLFEWQEHGYAPLTWKQRVVIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGTRALDDSVPDERSHLVTWFRRVLINKENIPKAIDQILNPDEETMDSIYKVAELAGHCTAREPYQRPDMGHSVNVLVPLVEQWKPTSHEEEQEDLQMSLPQALRRWQANEGTSSIFNDISISQTQSSIPCKPAGFANSFDSMDCR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1674 919 MobiDBLite consensus disorder prediction 442 466 - -
Aed5g1674 919 ProSiteProfiles Leucine-rich repeat profile. 85 107 IPR001611 GO:0005515
Aed5g1674 919 SUPERFAMILY Protein kinase-like (PK-like) 561 867 IPR011009 -
Aed5g1674 919 SMART LRR_typ_2 106 129 IPR003591 -
Aed5g1674 919 SMART LRR_typ_2 179 202 IPR003591 -
Aed5g1674 919 SMART LRR_typ_2 83 105 IPR003591 -
Aed5g1674 919 SMART LRR_typ_2 382 406 IPR003591 -
Aed5g1674 919 SUPERFAMILY L domain-like 56 428 - -
Aed5g1674 919 Pfam Protein tyrosine and serine/threonine kinase 577 845 IPR001245 GO:0004672|GO:0006468
Aed5g1674 919 SMART serkin_6 574 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1674 919 ProSiteProfiles Protein kinase domain profile. 574 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1674 919 Gene3D Phosphorylase Kinase; domain 1 537 651 - -
Aed5g1674 919 Pfam Leucine rich repeat 85 142 IPR001611 GO:0005515
Aed5g1674 919 Pfam Leucine rich repeat 378 419 IPR001611 GO:0005515
Aed5g1674 919 Gene3D Ribonuclease Inhibitor 320 443 IPR032675 -
Aed5g1674 919 CDD STKc_IRAK 580 853 - -
Aed5g1674 919 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Aed5g1674 919 Gene3D Transferase(Phosphotransferase) domain 1 652 877 - -
Aed5g1674 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
Aed5g1674 919 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 3 919 - -
Aed5g1674 919 MobiDBLite consensus disorder prediction 449 466 - -
Aed5g1674 919 Pfam Leucine rich repeat N-terminal domain 23 57 IPR013210 -
Aed5g1674 919 Pfam Leucine rich repeat N-terminal domain 324 356 IPR013210 -
Aed5g1674 919 PANTHER OSJNBA0070M12.3 PROTEIN 3 919 - -
Aed5g1674 919 Gene3D Ribonuclease Inhibitor 23 309 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1674 Aed-Chr5 20709497 20713907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1674 64 843 Receptor kinase-like Gene Family AT5G07280 33.129 1.19e-90 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aed5g1674 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1674 - - gmx:100286794 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1674 5 20709497 20713907 Aed5g1674 5 20709497 20713907 ECH