Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1666 ATGCAATCCCTTAAGTCACACCCTGCTCGTTTATTTTCTCTTTCCAATAATGTCTATTCATTCTCCACTGCTTCTTTCTCAACCCAATGCCAATCCATCATTGATCACCTAAATGCCAAGTTCGAATTCTCGACAACTCAATCCCTCTACATCTCAAAACGTGTTTCAACAAGCAGATTCCCAAAAAACCCCTTTTCTGTGCTCACTTTTTTCAAACAAATTGGGTTTTCTGAAGCCCAGATTCTGCTTTTGATTCGTCAGAAACCCCAAATACTGTTCACTGGCGTTGACAAAATCTTAAGACCCAAAATAGAGCTCTTTCAGCTGTTGGGTTTCGAGAGCTCGCAGTTGTGCAAGTTCATTTCCAAGAATTCCTCCATTTTGACTTTCAGTTTGAAGAAAACATTGGTACCCTCTGTTGAAGCCATTAGGAAAATTCTCTGCAATGACAAAGATTTTATTCATGTTTTGCACAAATGTGGCAGGATACTCCCAAGGTACAAAAAAATTATGAACAATGTTGTCTTCTTGGAGAACTGTGGCATTGTTGGGCCTCATCTTGCAATGCTACTCAAACTACAGCCAGGTATTATCATTGCACAACAGTCTGCTATTGAAAACTATGTTTCGCGCGCTGTAGACATGGGTTTCCATGTAAATTCAAGAATGCTTGTCCATGCAATCCATTCAATAAGTAGTTTGAGCTATAAAAAATTTAGGAGAAAGCTGGAGGTAATTAGTTGTTTTGGTTTTTCCAATGATGAGGGTTTGCAAATGTTCAGAAGAACCCCAACTTTGCTTAGAACATCAGAGAAGAAGTTGAAGTTTGGAATGGAATTCTTCTTGCATATAGTTATGCTGCCAAAGTCAGTCCTGGTTCACCAGCCAAGGGTTTTAATGTATAGCATGGAGGATCGTGTGCTTCCTCGATATAGAGTCTTCCAGCTCTTGGTAGAAAAAAATCTTTGCAAGAAGGTCCCCAGTTATATTTATTTGTTATGCTTGTCTGAGGAGATATTCTTGGACAAGAAGCCTTGGGCAATTGGGGAACACAAACATGTTGGTGCTTATGGTTTTTACCTCCTTCAGTTCTCTCCTCACCCTTCCAATTGCAATGAGATATATAATCTGATGGCAACAGATTATTCTCCCTAG 1155 0.3957 MQSLKSHPARLFSLSNNVYSFSTASFSTQCQSIIDHLNAKFEFSTTQSLYISKRVSTSRFPKNPFSVLTFFKQIGFSEAQILLLIRQKPQILFTGVDKILRPKIELFQLLGFESSQLCKFISKNSSILTFSLKKTLVPSVEAIRKILCNDKDFIHVLHKCGRILPRYKKIMNNVVFLENCGIVGPHLAMLLKLQPGIIIAQQSAIENYVSRAVDMGFHVNSRMLVHAIHSISSLSYKKFRRKLEVISCFGFSNDEGLQMFRRTPTLLRTSEKKLKFGMEFFLHIVMLPKSVLVHQPRVLMYSMEDRVLPRYRVFQLLVEKNLCKKVPSYIYLLCLSEEIFLDKKPWAIGEHKHVGAYGFYLLQFSPHPSNCNEIYNLMATDYSP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1666 384 PANTHER EMB|CAB62602.1 19 364 - -
Aed5g1666 384 Gene3D Transcription termination factor 3, mitochondrial 166 345 IPR038538 -
Aed5g1666 384 PANTHER CGI-12 PROTEIN-RELATED 19 364 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 Pfam mTERF 68 158 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 Pfam mTERF 151 245 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 Pfam mTERF 233 340 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 SMART mt_12 154 183 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 SMART mt_12 289 323 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 SMART mt_12 82 113 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Aed5g1666 384 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed5g1666 mTERF 9.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1666 K15032 - gmx:102661687 304.679