Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed5g1662 | ATGGACGAGGATTTTGAGTTCCCAAGTGCTGGCAACATGGAAATTCCTGAGGAGGAAGAGGTTGAGAGTCCGATCCTGAAGGTTGGGGAGGAGAAGGAGATTGGGAAGAATGGGCTGAAGAAGAAGCTGCTCAAGGAAGGTGAAGGTTGGTACACCCCTGACATTGGAGACCAAGTTGAAGTGCATTACACTGGAACCTTGCTTGATGGAACCAAATTTGATTCTAGCCGTGATAGGGGCACCCCTTTCAAGTTCAAGCTTGGCCAAGGGCAAGTGATAGAGGGATGGGATGAAGGTATCAAAACCATGAAGAAAGGTGAGAATGCCATTTTCACAATACCTCCAGAATTGGCTTATGGAGAGTCTGGTTCTCCTCCCACTATTCCCCCAAATGCAACTCTGCAGTTTGATGTGGAGTTGCTGTCTTGGACAAGTGTGAAGGACATATGCAAGGATGGAGGGATTTTGAAGAAGATTATTTCTGAAGGGGAGAAATGGGATAATCCCAAGGACCTGGATGAAGTGTTTGTTAAGTATGAAGCTAGGCTTGAGAATGGGACAGTCATCTCAAAATCTGATGGGGTGGAGTTCACTGTGGAAGAGGGGTATTTCTGTCCTGCTTTGGCCAAGGCTGTGAAAACAATGAAGAAGGGAGAGAAAGTTCTCTTGAATGTGCAGCCACAATGTGAGTGTGTTATCAGCAATATTTATTATGTGTCCAAGTTTTGCTTGTGTAAGTTTATTGACATTCAAAGTTTTGCAGATGCATTTGGTGAGAGTGGAAGGCCAGCCACAGGAGATGAAGGTGCCGTACCTCCAAATGCTTCTCTTCAAGTGGATCTTGAGTTGGTCTCATGGAAGATAGTGTCTGACATAACCAATGATAAAAAGGTTCTCAAGAAGACTTTGAAGGAAGGAGAGGGATATGAACGACCAAATGATGGAGCTGTAGTTCAAGTGAAACTGATTGGCAAGCTGCAAGATGGAACTGTTTTCATTAAGAAGGGCTACGATGATGAACAGCCATTCGAGTTCAAAATTGATGAAGCTGTATGTTTGATCGACCACGTAGAACAAGTAATTGATGGCCTTGACAAAGCTGTGAAGAACATGAAGAAAGGGGAAACTGCATTGCTGATCATGCAACCTGAATATGCTTTTGGTGCATCTGGTTCCCCTCAAGAATTGGCTAATGTTCCTCCTAATTCAACTGTGTACTATGAAGTTGAGCTGGTTTCCTTCGTAAAGGAAAAGGAATCGTGGGATCTGAATACACAAGAGAAGATTGAGGCAGCAGGGAAGAAAAAGGAAGAAGGGAATGCTTTATTTAAGGTTGGCAAATATGAAAGAGCTTCAAACAGATATGAAAAGGCCATTAAGTTTGTCGAGTATGATTCCTCCTTTGGTGATGAGGAGAAACGGCAGACTAAGGCATTGAAAATCACATGCAATCTCAACAATGCAGCCTGTAAGTTGAAGCTAAAGGACTACAGACAGGCAGAGAAGATGTGCACAAAGGTTTTAGAGCTTGATAGTAGAAATGTAAAAGCACTCTATCGGAGGGCACAAGCATATCTTCATCTTGTGGACTTGGATCTAGCTGAGATGGATATTAAGAAAGCCCTTGAGATTGAGCCTGACAACAGGGATGTAAAGATGGAGTACAAAATTTTGAAGCAGAAAGTGAGAGAATACAACAAGAAGGACGCACAGTTTTACGGCAGCATATTTGCAAAAATGAATAAACTAGAACAAGCAAGAACCCCAACAGAAAATCAGGAGCCTGTGCCAATGACTATAGACAGCAAAGCTTAA | 1815 | 0.4292 | MDEDFEFPSAGNMEIPEEEEVESPILKVGEEKEIGKNGLKKKLLKEGEGWYTPDIGDQVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGQGQVIEGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGILKKIISEGEKWDNPKDLDEVFVKYEARLENGTVISKSDGVEFTVEEGYFCPALAKAVKTMKKGEKVLLNVQPQCECVISNIYYVSKFCLCKFIDIQSFADAFGESGRPATGDEGAVPPNASLQVDLELVSWKIVSDITNDKKVLKKTLKEGEGYERPNDGAVVQVKLIGKLQDGTVFIKKGYDDEQPFEFKIDEAVCLIDHVEQVIDGLDKAVKNMKKGETALLIMQPEYAFGASGSPQELANVPPNSTVYYEVELVSFVKEKESWDLNTQEKIEAAGKKKEEGNALFKVGKYERASNRYEKAIKFVEYDSSFGDEEKRQTKALKITCNLNNAACKLKLKDYRQAEKMCTKVLELDSRNVKALYRRAQAYLHLVDLDLAEMDIKKALEIEPDNRDVKMEYKILKQKVREYNKKDAQFYGSIFAKMNKLEQARTPTENQEPVPMTIDSKA | 604 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed5g1662 | 604 | Coils | Coil | 548 | 568 | - | - | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 262 | 293 | - | - | |
| Aed5g1662 | 604 | SUPERFAMILY | FKBP-like | 289 | 432 | - | - | |
| Aed5g1662 | 604 | SMART | tpr_5 | 515 | 548 | IPR019734 | GO:0005515 | |
| Aed5g1662 | 604 | SMART | tpr_5 | 432 | 465 | IPR019734 | GO:0005515 | |
| Aed5g1662 | 604 | SMART | tpr_5 | 481 | 514 | IPR019734 | GO:0005515 | |
| Aed5g1662 | 604 | MobiDBLite | consensus disorder prediction | 585 | 604 | - | - | |
| Aed5g1662 | 604 | Gene3D | - | 28 | 146 | IPR046357 | GO:0003755 | |
| Aed5g1662 | 604 | ProSiteProfiles | TPR repeat profile. | 515 | 548 | IPR019734 | GO:0005515 | |
| Aed5g1662 | 604 | Pfam | Tetratricopeptide repeat | 492 | 547 | - | - | |
| Aed5g1662 | 604 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 56 | 144 | IPR001179 | GO:0003755 | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 415 | 585 | - | - | |
| Aed5g1662 | 604 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 172 | 287 | IPR001179 | GO:0003755 | |
| Aed5g1662 | 604 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 53 | 141 | IPR001179 | GO:0003755 | |
| Aed5g1662 | 604 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 169 | 260 | IPR001179 | GO:0003755 | |
| Aed5g1662 | 604 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 309 | 412 | IPR001179 | GO:0003755 | |
| Aed5g1662 | 604 | Gene3D | - | 147 | 287 | IPR046357 | GO:0003755 | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 233 | - | - | |
| Aed5g1662 | 604 | SUPERFAMILY | FKBP-like | 148 | 287 | - | - | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 297 | 414 | - | - | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 233 | - | - | |
| Aed5g1662 | 604 | SUPERFAMILY | FKBP-like | 32 | 148 | - | - | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 415 | 585 | - | - | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 297 | 414 | - | - | |
| Aed5g1662 | 604 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 262 | 293 | - | - | |
| Aed5g1662 | 604 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
| Aed5g1662 | 604 | Gene3D | - | 288 | 417 | IPR046357 | GO:0003755 | |
| Aed5g1662 | 604 | SUPERFAMILY | TPR-like | 421 | 580 | IPR011990 | GO:0005515 | |
| Aed5g1662 | 604 | Gene3D | Tetratricopeptide repeat domain | 418 | 575 | IPR011990 | GO:0005515 | |
| Aed5g1662 | 604 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Aed5g1662 | 604 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 315 | 415 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed5g1662 | Aed-Chr5 | 20642590 | 20647628 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed5g1662 | 15 | 604 | Calmodulin-binding Proteins | AT5G48570 | 69.360 | 0.0 | 820 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed5g1662 | K09571 | - | gmx:100819747 | 1006.9 |