Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1648 ATGACACCTGGTTACGAATACGATATTAATGATCTGCATCAAGAGGCTCAAGCCAGATGGTTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTTCCAGCTCACCCAGGAGCCCCCGCAACAGCCAACCAGTGGATCCCTGTTTCTGTTTAACAAAAGAGTCCTGCGTTTCTTCCGTAAAGATGGCCATAACTGGCGTAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACACGAAAGGCTGAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTATTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGCATATGAGCATATTGTTCTTGTGCATTATAGGAACACAAGTGAGGGAAGGCTCAGTTCTGGAGCTGGCGCACAATTGTCACCAAGTTCCCTTTCTGCATTTAGTCAGAGTCCTAGCCCATATTCTACACAGAATCCAGGGTCAACATCCATACTTGGTGATTCATATGAACCTAATCAGAGTTTCTCCAGTCCTGGATCTACTGAAGTTACCTCTGATATATCCGTTCTGAACAATAAAATGGGTCACATGGATGGAACAGATGTGGAATCAAGAACCTCATCTGAACTTGAGGTTACTCAAGCTTTGCGCCGACTGGAGGTGCAGTTAAGTTTGAATGAGGACAACTTTGAAGATATTGTTCCCTTCTGCAATGAGCACGAAGCTGCACATGATTCAAACCCTCAGCATGATCAAGGGTTGATCAGCAATCATGAGCAATCTGCAACTTTCTCTGGACCTGATGATCAAGGGCTATTTTATGAGGAATATAATGGAAGGCAAGGTGATGGTGGCAAAGGTTATCATGAATTAATAGACCATGGTTACCCTGATGGAAGTGAAAATGCTTTATGGACAGAGGTGCTGGAATCATGTAAGTCCTCATCTGTAGTCAAGTTACCACAGAAAAATGTATACACGCCAGCTAGAAATGAAAATTCAGTATCTTCTGAGAGAAGGGTACCAGTTTCCAACCAGGAAAACAGTCACTGGCTCAACTTCAGCAGTAATAATTCCGAAAACTGTATGGTTTACTTTCACCTGATTAACTTAACATTTTTTACATATTTTGGAGTTTCTTCAATTTCTGATTCCCCTCCCATGTTAGCAGCTGTTTTCTCACTACCTCAAGATGAAGTCAAATTTCCTGCATATTCTTCTATGGTGGAAACACAAGTAATTAATTCTGACTACTATGAAACATTGTTTGACCCAAGCCAAATTGTAGCACCTCCAGATGCAGATGCAAGCTTGACTGTTTCACAAAAACAGAAATTTACTATTAAGACAATCTCCCCAGAATGGGGTTATGCCTCTGAGACTACTAAGGTCATTGTTGTTGGGTCTTTTCTCTGTCATCCCTCAGATTCTGCTTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCTGTTGAGATAATTCAGGATGGTGTAATCTCCTGTTATGCTCCATCTCACCTCCCAGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCCTGCAGTGAAGTCAGAGAATTTGAATATTGTGATAAGACCAATAGTTTCACTCGATGTACTCAATCGGAAATAGAAGCCACTAGAAGTCCAGATGAGCTGTTATTACTTATTAGATTAGGGCAGATGCTTCTTTCTGCATCAACAATAAAGAATGACAGCATAGAATCAGAAATTCCTCTCATAAAACAGAAAGCTGATGATGACTCATGGAGCCATATTATAGAGGCTCTTCTAGTTGGCAGTGGGACGTCAACCGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTTCAACAGTGGCTTTCTTGCAGATCTCAGGAAAAAGATGAAGAGACAAGCTGCTCTTTGTCCAAGAAAGAGCAAGGGATTATTCACATGGTTGCTGGGTTAGGTTTTGAGTGGGCCTTGAACCCTATTCTCACTTGTGGAGTTAATATAAATTTCCGTGACATCAGTGGGTGGACTGCCCTTCACTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAAATGCACAAGATCCAATCGGTAAAACTGCTGCATCTATTGCAGCCAGCAGTGGGCACAAGGGACTGGCAGGGTATCTTTCAGAGGTAGCTGTAACAAGCCACCTGTCATCACTTACACTGGCAGAGAGTGAATTATCGAAAAGTTCTGCTGAGCTTCAGGCAGATATGACTGTTAACAGTGTCTCTAAGGAAAATCTTACTTCCAGTAAGGATCAGACGTCACTTAAAGATACCTTGGCTGCTGTCAGAAATGTAACTCAGGCAGCTGCACGGATACAATCTGCTTTTCGCTCACATTCTTTTAGAAAACGGAGAGCAAGAGAAGCAGGTGCTAGCACGGGTGGCATTGGTACTGTTTCAGAGATTTCTGCTATGTCAAAACTTGCCTTTCGGAACTCACGCGATTATAATTCAGCTGCTTTATCGATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGACTTCTTAACGTTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGCTACCAGGTTAGGAAGCATTACAAAGTAATATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTACGATGGAGGAGAAAAGGACCTGGTTTACGAGGTTTCCGACAAGAGATGGACATGAATATGAATGAAAATGAAGATGAAGACATCCTCAAGGTGTTTCGAAAACAGAAAGTGGATGCAGAAATTGAAGAGGCTGTTTCACGGGTGCTGTCCATGGTCGACTCACCGGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAATATCGTCAAGCTAAGGCCGAACTTGCGGGTACGAGTGACGAAGTATCATTATCAACATCTGTAGAAGATGCTGCCTTATTTATGGATGATCTTTATCCATTCCCCTGGGAGCAACGCTAG 3036 0.4302 MTPGYEYDINDLHQEAQARWLKPAEVMYILQNHEKFQLTQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPIFQRRSYWMLDPAYEHIVLVHYRNTSEGRLSSGAGAQLSPSSLSAFSQSPSPYSTQNPGSTSILGDSYEPNQSFSSPGSTEVTSDISVLNNKMGHMDGTDVESRTSSELEVTQALRRLEVQLSLNEDNFEDIVPFCNEHEAAHDSNPQHDQGLISNHEQSATFSGPDDQGLFYEEYNGRQGDGGKGYHELIDHGYPDGSENALWTEVLESCKSSSVVKLPQKNVYTPARNENSVSSERRVPVSNQENSHWLNFSSNNSENCMVYFHLINLTFFTYFGVSSISDSPPMLAAVFSLPQDEVKFPAYSSMVETQVINSDYYETLFDPSQIVAPPDADASLTVSQKQKFTIKTISPEWGYASETTKVIVVGSFLCHPSDSAWACMFGDVEVPVEIIQDGVISCYAPSHLPGKVTLCITSGNRESCSEVREFEYCDKTNSFTRCTQSEIEATRSPDELLLLIRLGQMLLSASTIKNDSIESEIPLIKQKADDDSWSHIIEALLVGSGTSTGTVDWLLEELLKDKLQQWLSCRSQEKDEETSCSLSKKEQGIIHMVAGLGFEWALNPILTCGVNINFRDISGWTALHWAARFGREKMVASLIASGASAGAVTDPNAQDPIGKTAASIAASSGHKGLAGYLSEVAVTSHLSSLTLAESELSKSSAELQADMTVNSVSKENLTSSKDQTSLKDTLAAVRNVTQAAARIQSAFRSHSFRKRRAREAGASTGGIGTVSEISAMSKLAFRNSRDYNSAALSIQKKYRGWKGRKDFLTLRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGPGLRGFRQEMDMNMNENEDEDILKVFRKQKVDAEIEEAVSRVLSMVDSPDAREQYHRMLEKYRQAKAELAGTSDEVSLSTSVEDAALFMDDLYPFPWEQR 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1648 1011 Coils Coil 966 986 - -
Aed5g1648 1011 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 5 995 - -
Aed5g1648 1011 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 5 995 - -
Aed5g1648 1011 SMART CG_1_2 12 130 IPR005559 GO:0003677
Aed5g1648 1011 Pfam Ankyrin repeats (many copies) 681 738 IPR002110 GO:0005515
Aed5g1648 1011 MobiDBLite consensus disorder prediction 133 187 - -
Aed5g1648 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 838 894 IPR027417 -
Aed5g1648 1011 ProSiteProfiles IQ motif profile. 798 826 IPR000048 GO:0005515
Aed5g1648 1011 ProSiteProfiles Ankyrin repeat profile. 679 711 IPR002110 GO:0005515
Aed5g1648 1011 Gene3D - 848 896 - -
Aed5g1648 1011 Pfam IQ calmodulin-binding motif 873 892 IPR000048 GO:0005515
Aed5g1648 1011 Pfam IQ calmodulin-binding motif 850 868 IPR000048 GO:0005515
Aed5g1648 1011 Pfam IPT/TIG domain 450 533 IPR002909 -
Aed5g1648 1011 ProSiteProfiles IQ motif profile. 848 877 IPR000048 GO:0005515
Aed5g1648 1011 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Aed5g1648 1011 ProSiteProfiles IQ motif profile. 871 896 IPR000048 GO:0005515
Aed5g1648 1011 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Aed5g1648 1011 Gene3D - 607 746 IPR036770 -
Aed5g1648 1011 SMART iq_5 847 869 IPR000048 GO:0005515
Aed5g1648 1011 SMART iq_5 796 818 IPR000048 GO:0005515
Aed5g1648 1011 SMART iq_5 870 892 IPR000048 GO:0005515
Aed5g1648 1011 Gene3D Immunoglobulins 443 538 IPR013783 -
Aed5g1648 1011 ProSiteProfiles Ankyrin repeat region circular profile. 679 705 - -
Aed5g1648 1011 MobiDBLite consensus disorder prediction 262 282 - -
Aed5g1648 1011 CDD IPT 450 533 - -
Aed5g1648 1011 SUPERFAMILY E set domains 450 533 IPR014756 -
Aed5g1648 1011 SMART ANK_2a 718 747 IPR002110 GO:0005515
Aed5g1648 1011 SMART ANK_2a 679 708 IPR002110 GO:0005515
Aed5g1648 1011 SUPERFAMILY Ankyrin repeat 648 741 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1648 Aed-Chr5 20539946 20548465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1648 5 1007 CAMTA Transcription Factor Family AT1G67310 50.518 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Aed5g1648 CG-1 5.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1648 K21596 - gmx:100786880 1715.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1840 7 21703634 21715008 Aed5g1648 5 20539946 20548465 PCT