Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1633 ATGAAACCCACGGCAACATTCTTCTTTCTCCTAGCCTCAACAACACTCCTTTGTCTTTCCCTCGGAACAACAACGTTCCAAACCACCCTCTTTATAACCCTTCTCGCAATTTCCTTAAACCACTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACTATCAAAATGATTATTATCATAACAATAACAACAAAAAACTTACTGGGCCTATGGGCTGGCCCATACTTGGGACTTTGCCTCTCATGGGCTCTTTAGCTCACGCGAAACTCGCTGCTTTAGCCACTTCGTTAAACGCGAAGAGGTTAATGGCGTTGAGTCTGGGACCCACTCCTGTTGTTATAAGTAGCCATCCTGATACCGCTAGAGAAATCTTACTAGGTTCGTCGTTTTCGGATCGTCCGATAAAAGAATCGGCACGCGCTCTGATGTTCGAGCGTGCCATTGGTTTCGCTCCTTCCGGAACCTACTGGCGACACCTACGTAGGATTGCGGCGTTCCACATGTTCTCTCCGAGGAGGATTCAGGGCTTGGAGGGTCTCCGACAGCGCGTGGCTGACGACATGGTGAAGAGCGCGTGGAGGGAGATGGAGGAGAAGGGGGTGGTGGAGATTCGCGGTGTGCTTCAGGAAGGGTCGCTTCGTAATATTTTGGAAAGTGTGTTTGGGAGTAATGACAAAAGTGAGGAGTTGGGGGATATGGTTAGGGAAGGGTATGAGTTGATTGCGATGTTTAACTTGGAAGATTATTTTCCTTTCAAGTTTTTGGACTTTCATGGAGTGAAGAGAAGGTGCCACAACTTGGCGGCTAAGGTTGGTAGTGTGGTGGGCCATATTGTGGAGGAGCGAAAAAGAGAAGGAAGTTTTCTTGGAAAGAATGATTTTCTTACCACTTTGCTCTCTTTGCCCAAAGAAGAAAGATTAGATGATTCAGATATGGTGGCTATTCTCTGGGAAATGGTATTTCGAGGAACAGACGCGGTTGCGATACTCCTTGAATGGGTCATGGCTAGAATGGTTTTACACGAAGATGTGCAAAAGAAAGCCCGCGAAGAAATCGACACGTGCATCGGTCATAACAGTCACATGCGAGACTCAGATATTGCCAATCTCCCATACCTCCAGGCGATAGTGAAAGAAGTTCTCCGGCTGCACCCACCGGGCCCGCTACTATCATGGGCCCGTCTCGCAGTCCATGACGTCCACGTGGACAAAGTCCTTGTGCCAGCTGGCACGACAGCAATGGTCAACATGTGGGCCATATCGCATGACTCATCCATCTGGGAAGACCCATGGACTTTCAAGCCCGAGAGGTTCCTCAAAGAAGAAGTTTCCGTCATGGGATCGGACTTGAGGCTCGCACCCTTCGGGGCTGGACGTAGGGTGTGTCCGGGCCGGGCCTTAGGTTTGGCCACGACCCATCTCTGGCTCGCACAACTTCTTCGCCATTTCATATGGCTTCCCGCGCAACCCGTGGATCTTTCTGAATGCCTTAGGCTTTCCATGGAAATGAAGACACCTCTGCGATGTCTAATGGTTCGTAGATAA 1542 0.4968 MKPTATFFFLLASTTLLCLSLGTTTFQTTLFITLLAISLNHWLVPGGFAWRNYQNDYYHNNNNKKLTGPMGWPILGTLPLMGSLAHAKLAALATSLNAKRLMALSLGPTPVVISSHPDTAREILLGSSFSDRPIKESARALMFERAIGFAPSGTYWRHLRRIAAFHMFSPRRIQGLEGLRQRVADDMVKSAWREMEEKGVVEIRGVLQEGSLRNILESVFGSNDKSEELGDMVREGYELIAMFNLEDYFPFKFLDFHGVKRRCHNLAAKVGSVVGHIVEERKREGSFLGKNDFLTTLLSLPKEERLDDSDMVAILWEMVFRGTDAVAILLEWVMARMVLHEDVQKKAREEIDTCIGHNSHMRDSDIANLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWTFKPERFLKEEVSVMGSDLRLAPFGAGRRVCPGRALGLATTHLWLAQLLRHFIWLPAQPVDLSECLRLSMEMKTPLRCLMVRR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1633 513 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PANTHER CYTOCHROME P450 78A7-RELATED 18 513 - -
Aed5g1633 513 Gene3D Cytochrome P450 54 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Aed5g1633 513 SUPERFAMILY Cytochrome P450 68 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1633 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 18 513 - -
Aed5g1633 513 Pfam Cytochrome P450 68 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1633 Aed-Chr5 20451770 20453932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1633 20 513 Cytochrome P450 AT1G13710 51.569 2.79e-175 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1633 - - gmx:100817944 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1856 7 21807257 21809932 Aed5g1633 5 20451770 20453932 PCT