Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1616 ATGGCGGCTGGGAAACACGGCGGTTACCGCGAAAACGAGTTCAGAGAGCGCGAATCGAAGTTGGAAGTTTCCAGACGCGGATTCGCGAATTCGAAAGAGGATTACGATCGTGTTAGAAATGGTGGTGGCGATGTTGTGAGGGGTGGGTCCAGGGATAGAGCTAGGGTGAGGCAGAAGGATATTAGAGAGAGGGAAGGTGTTAACGGTGGTTATCGATCCTCTTCGAGTAGGAGTGACTCTGGCAGCAGTGGCCTTGGTCCTCGCCGGTGTGGTTTCTCTGCCAAGTCAGTTGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCAGATGATGCTATTGAATCAGAGCCGGGTGTGAAAGACTCCGAGGTTGCCATGTTGGAAGAAACCAGGACTCGATCTCCGCCTGGGCATGAGAGGAAAAGGAAGTTTTCGCCCATTGTGTGGGATCAGGATGACAAGGAAGTCAACGAGTCATCCAGAGTTAGGGTTTCTTCCTCTGCGGTGAAGAAGGCTGCACTTCCTCCTCCGCCTCCGTTGCCAAAGGTGTTCCGTCAGTCACAGTCGCCCAATGCTCCGGTTGGTGTAGTTGAAATTCATCCTGTCAAGAACAGGGAGACTGAGGGTGTTCAGTTGGATTCAGTATCTAAGATTACCTTGCCCTCTCCTTCAGGTTTGCATTTGTCGCCTCCTCCGAAAGGGAGGTGGGGTAATGATGAGGAAGCTGATCATCCAGAAGGTGAAGATTATGTTCCAACTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGTTGATGAGGGTGAGATCCTCAATGATGAGGAAATGCCCAAATGGAGGAGGAGGGTGTCTCCTGAGTTATTGGATGGTAGACTAAGGAACAAGCTAGTGAGCCCTGAGGAATCCAAGGTAGAAGGTGTTGAAAGAGCTCAAGTCAGATCATCTGAATCTGAAGAAAGAGGTGTTCGTGGGAGAACTTCCAGTGGTGATGATTATCCTGGTATCGAGTCAGAGAAGGATGACTACATGGAGACTGATGCTCAAGGTGGGAGAAGTGAAACCAGTGCCAGTCACTCAGACACAGATTCTGAAGATGAAGATGATGGCCGGGAGACTCCAGAACCTCCTACTCCACCTCAAAGAACAGTCAACATGCTCCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAGGGAACATATGGTGTTGTATATAGGGCTAGAGATAAAAAGACTGGAGAAATTGTAGCATTGAAGAAGGTCAAAATGGAGAAGGAAAAAGAGGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGACGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTCATGGAATATATGGAACATGACCTCAAAGCATTAATGGAGGCAATGAAGCAACCTTTTAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAACCTGCTTCTAAATAATAGGGGTGAGCTCAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGTCCTTTAAAGCCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTTTAGGTTGTATAATGGCTGAGCTATTGTCTAAGGAACCACTGTTTAATGGGAAAACAGAGTTTGATCAACTTGACAAGATTTTCCGGATACTTGGCACACCAAATGAAACAATTTGGCCTGGGTTTTCAAAATTACCTGGAGTCAAGGTCAATTTTGTCAAACACCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCTGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAGCGGATCACTGCCGAAGCTGCTCTAAATCATGAGTGGTTTCGTGAAGTTCCTCTTCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCAGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAATCTGGGACTGGTGGAATTTTTGGCTGA 2241 0.4632 MAAGKHGGYRENEFRERESKLEVSRRGFANSKEDYDRVRNGGGDVVRGGSRDRARVRQKDIREREGVNGGYRSSSSRSDSGSSGLGPRRCGFSAKSVDREPGELSSESGSDDAIESEPGVKDSEVAMLEETRTRSPPGHERKRKFSPIVWDQDDKEVNESSRVRVSSSAVKKAALPPPPPLPKVFRQSQSPNAPVGVVEIHPVKNRETEGVQLDSVSKITLPSPSGLHLSPPPKGRWGNDEEADHPEGEDYVPTRNISSSRWAAGDNSPVDEGEILNDEEMPKWRRRVSPELLDGRLRNKLVSPEESKVEGVERAQVRSSESEERGVRGRTSSGDDYPGIESEKDDYMETDAQGGRSETSASHSDTDSEDEDDGRETPEPPTPPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKALMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGESGTGGIFG 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1616 746 MobiDBLite consensus disorder prediction 1 190 - -
Aed5g1616 746 MobiDBLite consensus disorder prediction 721 735 - -
Aed5g1616 746 Gene3D Transferase(Phosphotransferase) domain 1 483 722 - -
Aed5g1616 746 CDD STKc_CDC2L1 394 691 IPR045267 GO:0004674|GO:0005524|GO:0006468
Aed5g1616 746 PANTHER CELL DIVISION PROTEIN KINASE 145 746 - -
Aed5g1616 746 MobiDBLite consensus disorder prediction 235 251 - -
Aed5g1616 746 MobiDBLite consensus disorder prediction 8 67 - -
Aed5g1616 746 SMART serkin_6 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1616 746 MobiDBLite consensus disorder prediction 210 224 - -
Aed5g1616 746 MobiDBLite consensus disorder prediction 69 83 - -
Aed5g1616 746 PANTHER CYCLIN-DEPENDENT KINASE G-2-LIKE 145 746 - -
Aed5g1616 746 Gene3D Phosphorylase Kinase; domain 1 385 482 - -
Aed5g1616 746 Pfam Protein kinase domain 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1616 746 MobiDBLite consensus disorder prediction 114 161 - -
Aed5g1616 746 MobiDBLite consensus disorder prediction 276 352 - -
Aed5g1616 746 MobiDBLite consensus disorder prediction 206 389 - -
Aed5g1616 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Aed5g1616 746 SUPERFAMILY Protein kinase-like (PK-like) 392 697 IPR011009 -
Aed5g1616 746 MobiDBLite consensus disorder prediction 721 746 - -
Aed5g1616 746 ProSiteProfiles Protein kinase domain profile. 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1616 Aed-Chr5 20339589 20346600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1616 391 736 Core Cell Cycle Gene Families AT5G10270 45.028 9.40e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Aed5g1616 Pkinase 8.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1616 K08818 - gmx:100792524 1273.84