Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1601 ATGGAGTTAATATGCAGAGAAAGCATAAAACCTTCCACACCAACCCCTCCTCACCTCAGAATCTTTCCACTCTCCTTCATAGATCACATCGTTTTCCGTAACTACATCCCCTTACTCTTCTTTTACTCCTCCTCAAACCCAAGCCATGATCATGACCAAACTTCCAAAATATCAAAACTCAAGAATTCATTATCCCAAGTTTTATCCCGATACTACCCCTTTGCAGGCAGGCTCAGAGACCAAGTTTCCATCGACTGCAACGACCAAGGAGTGTCGTTTCTAGTCACAAGCCTCAGATCCAACCTTTCATGGATCCTCCACAAGCCCACGGAAGCATCGTTGAACCCTTTGTTCCCCGATGAGTTACAGTGGAAGCCAATGAAGAACACGACTGATTCAACTATCATAGCGATACAAGTAAACTGTTTTGCATGCGGAGGAATCGCAATAGGCGTCTGCATGTGTCACAAAGTTGGCGACGCCGCCACTCTTTCTAACTTCATCAACGACTGGGCCACACTCAACCGCCACCAAGAACAACAACTACCCTTCCCAGTTCCTGGGGCTTCACTTTTCCCACAAGGGGATTTACCTCTTTACCCCGAAGTCGCGTTCGTGAAAAACGACACCGTATGCAGAAGGTTTGTCTTCGAGGCCTCTAAGATTGACTCCCTCAAAGCCGCAGTGTCCTCCCACAGCGTGCCTAACCCCACGCGCGTGGAGGTTGTCAGCGCGTTGATCTACAAGCGCGCAGCTTCCGCTTTGGGTTTGGCTCTGAACACGACGACGTTCCGCACCGCGGTGAACCTCCGCACGAGAACGGTTCCTCCACTCCCCGAGAAGAGCGTGGGGAACCTGGTTTGGTTCCTGTTTTTGCTTAACCCTAATCCAGAAACGGAGCTGCACGATTTGGCGCGCAAAATGAAACAAGGCTTAACCGAGTTTTGTGACACGTGTGCGAAGAAGTTCGGAGGCGAGGACAGGGACTTGGATTTCATCTCGGAGTGTCTGAAGCAAGCTACAACTACTGGCTCGGTTCCCGAGGCTGATGAAGAGAGTCAAAGTCAAACAATGTTTTGTTGCGCGAGTTGGTGCAGGTTTGCGATGTATGAAGCGGATTTTGGGTGGGGGAAACCGGTGTGGTTTACCACTAGTGAGTGTCCCGTGAAGAATAGCATAGTTTTGATGGATACGAGGGATGGGGGTGGGATTGAAGCGCTTGTGAACATGGAGGAGCATGACATGGCTAAGTTTGAGCGTGACGTGGAGCTTCTTCAATATGCTTCTCTCAATCCTGCAGTAGTTTTAATTGGAGAAGGAAATGATGGTGGTGAAGTTACGATTTAA 1347 0.4937 MELICRESIKPSTPTPPHLRIFPLSFIDHIVFRNYIPLLFFYSSSNPSHDHDQTSKISKLKNSLSQVLSRYYPFAGRLRDQVSIDCNDQGVSFLVTSLRSNLSWILHKPTEASLNPLFPDELQWKPMKNTTDSTIIAIQVNCFACGGIAIGVCMCHKVGDAATLSNFINDWATLNRHQEQQLPFPVPGASLFPQGDLPLYPEVAFVKNDTVCRRFVFEASKIDSLKAAVSSHSVPNPTRVEVVSALIYKRAASALGLALNTTTFRTAVNLRTRTVPPLPEKSVGNLVWFLFLLNPNPETELHDLARKMKQGLTEFCDTCAKKFGGEDRDLDFISECLKQATTTGSVPEADEESQSQTMFCCASWCRFAMYEADFGWGKPVWFTTSECPVKNSIVLMDTRDGGGIEALVNMEEHDMAKFERDVELLQYASLNPAVVLIGEGNDGGEVTI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1601 448 Pfam Transferase family 2 424 - -
Aed5g1601 448 PANTHER F21J9.9 3 435 - -
Aed5g1601 448 Gene3D - 208 429 IPR023213 -
Aed5g1601 448 Gene3D - 1 198 IPR023213 -
Aed5g1601 448 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1601 Aed-Chr5 20254132 20255478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1601 1 420 Monolignol Biosynthesis Gene Families AT5G48930 23.841 1.71e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1601 - - gmx:100806928 714.531