Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1598 ATGACTGATGACAATTACTTGTTTTCTTCTGACTCATTTCTATTATATGTTTCAGTGACTACATGTGACATAGTGATCAGCGATGTGAACATGCCTGACACGGATGGTTTCAAACTTCTCGAGCAAGTTGGACTTGAGATGGATCTTCCTGTCATCAATCAGTCTGGTGATGGTAACCTGTTTTCTGTAGAAGAAATGACCTCAATTAAGAAAAGAAAAGATGTAGATAACATTCATGATGACAAAGAATTTGGAGACCATTCTCCCACAAAAAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAAAGTTGGTCCCAAGAAAATTCTAGATCTAATGAACGTTCTGTGGCTGACCAGAGAAAATGTTGCCAGTCACTTGCAGACCTTGATGAGAAACAAATTGTTCTGCAGAAATACAAGCTCTACTTGAGTAGGTTGCAAAAGGAAAATGATCAGAAATCTCCCTCAAGTGGAATAAAAGCACTCGGATTCACCTTCAAAAGATCTAGGAATACTGCAAACAATCAACAGAATGATATTGACACTGACAGCTTCAGTTATTCAGATGGAACTTTACTACTTCAGATGGATGCTACAATTCATGAAGGTGATCTCAAGGGAATTGTGTCAGAGCCTACAAGAGAAAAAAGAAGAGCATCCACTAGTGAAATTCCTGATCCAAAGATACAAAAAAGTTCACAACCTTTTGCTTCTGTAGAGTCATCAGAAGCAAACCATGATGTTGTCTTTGATTGCACCATACCAACAAAGTACTCTTGGAGTGAGTTTCCAAAAGGGCAACTCAAGGAAGAAAAGAAGACGCTTGTTCAATTAGAGGATAGCTTCAGCCAGTTGCCATTGCATGGTACACAGCATCACATTCAGGTTGATCAATCACAATCAATTGCCTCAATAAATTCCAATCCCTCTATAACAACAGAAGAGGAGGTTGCTGCCAAATTAGAGACCAAACCTTTGTATGCTGGTTACAAGAGTGATTACGTGAGTCCTGTGAGTTCAATAGGATCTGCAGTTGAAGCCTTTCCTAGTCAGTCCAAAAGTCTTATGGTGAATGATCAATCAAGTTTGAGCTTGAAGACTCAGGGATGTAATCTAGATTGCATTTCTGATCTGGATTTTCACCAAAGAAACCTATTATTGGCAGCTTCTGCACCTTTGGAGGAGGACTTAAATTTCTTTTTGCTGCATGGTGAATGCTACAACATGAATTTTGGCCTGCAGAATATAGATATGTTAGAGTATTATGATATTGCTAAAGTCCCTAGCCACTTTTATGATTCAGCAGATTATTCAGCGGTCGATCAAAGTCTATTCATAGCATGA 1350 0.3881 MTDDNYLFSSDSFLLYVSVTTCDIVISDVNMPDTDGFKLLEQVGLEMDLPVINQSGDGNLFSVEEMTSIKKRKDVDNIHDDKEFGDHSPTKKARVVWSVDLHQKSWSQENSRSNERSVADQRKCCQSLADLDEKQIVLQKYKLYLSRLQKENDQKSPSSGIKALGFTFKRSRNTANNQQNDIDTDSFSYSDGTLLLQMDATIHEGDLKGIVSEPTREKRRASTSEIPDPKIQKSSQPFASVESSEANHDVVFDCTIPTKYSWSEFPKGQLKEEKKTLVQLEDSFSQLPLHGTQHHIQVDQSQSIASINSNPSITTEEEVAAKLETKPLYAGYKSDYVSPVSSIGSAVEAFPSQSKSLMVNDQSSLSLKTQGCNLDCISDLDFHQRNLLLAASAPLEEDLNFFLLHGECYNMNFGLQNIDMLEYYDIAKVPSHFYDSADYSAVDQSLFIA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1598 449 MobiDBLite consensus disorder prediction 227 242 - -
Aed5g1598 449 PANTHER TWO-COMPONENT RESPONSE REGULATOR 55 427 - -
Aed5g1598 449 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 58 - -
Aed5g1598 449 SUPERFAMILY CheY-like 19 65 IPR011006 -
Aed5g1598 449 MobiDBLite consensus disorder prediction 209 242 - -
Aed5g1598 449 MobiDBLite consensus disorder prediction 209 226 - -
Aed5g1598 449 PANTHER TWO-COMPONENT RESPONSE REGULATOR 55 427 IPR045279 GO:0009736
Aed5g1598 449 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 58 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1598 Aed-Chr5 20228784 20230766 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1598 64 449 Response Regulator Gene Family AT1G67710 28.916 1.32e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed5g1598 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1598 - K14491 gmx:100806394 571.237