Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1592 ATGGATTTATCTTCTCTCTTTCTTCTTTTAATTCCTCTGTTGACATCATTTTCTGTTTGCCAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGGACAAGTAACTACACTGATAACAGCACGGGGCTGACATGGATCTCAGATTCTGGTACCATGCAACATGGCATTTCAGTGGAAGTGGAGATTCCAAATGGAAGAAGCATGGTGCAGTATCAAAAGCGGAGAGATTTTCCCATAGACAACAGCAAGAAGTACTGTTACACACTAAGCACTGAAGAGAGAAGAAGATATTTAGTGAGAGCAACGTTTCAGTATGGAAGCTTGGACAGTGGAAACACTTACCCTCAGTTTCAGCTCTACTTGGATGCAACCAAATGGGCTACTGTGTCAATTTATGATGCCTCGAGAATCTATGTTAAGGAAATGATCATAAGGGCACCCTCAAATTCTATTGATGTCTGCATGTGCTGTGCTACAACTGGTTCTCCTTTCATTTCTACTCTTGAGCTTCGGCCATTGAATCTTTCAATGTATGCGACGGATTTTGAGGACAATTTCTTCTTAGAAGTTGCTGCAAGAATCAACTTTGGAGCTCCAACTGAAGATGCTGTCAGAATTCTTTCGAGAAGGAATGTGAAGGGTGAAATCCCACCTGAGCTTAGCAATATGGAAGCATTGACAGAGTTGTGGTTAGATGGAAACTTGCTTACTGGACAGTTACCTGACATGAGCAAACTTGTAAATCTAAAGATTGTGCATTTAGAGAACAACAAGTTGACAGGTCGACTACCATCTTACATGGGTAGTTTGCCAAGCTTAGAAGCATTCTATGATGGTAATCCTGAACTATACAGAGGAAAAAAAAAGCAGCATTTTAAGATGGTTGTGGGAATTTCAATTGGAGTACTAGTGATTCTATTAATATTGTTTTTAGTAAGTTTGGTGCTATTGCTTAATACACGGAGAAAGGCGTCTCAAAAGAAACGTGAGGAAAAAGCAGGCATTTCTGGACGCACTAACAGTAAACCTTTAACTGGATACTCATTTCTTCGGGGTGGAAATTTAATGGATGAAAATACTACTTGCTATATTACACTCTCAGAGTTGACAGAAGCTACTGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAAAGATGGAAAAGAAATAGCAGTTAAAAGTATGAATGAATCATCTTGCCATGGGAACCAGCAATTTGTTAATGAGGTGGCTCTCCTATCCAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATACTGTGAAGAAGAGTGTCAGCATATACTGGTTTACGAGTATATGCACAATGGCTCTTTACGCGATCACATTCATGAGAGTTCTAAGAAGAAGAACTTGGACTGGTTAGCTCGTCTTCATATTGCAGAAGATGCAGCTAAAGTATATTGCAAAATTCTAACACACTTAAGTTCAACCATATCTCAAAGAAGCAATGTTTTGCAGGCAAGATCCTTAACTCGTAAAGGAGATGCAATGAGCATCATTGACCCTTCTCTAGATGGGAATGCCAAAACTGAGTCGATTTGGAGAGTGGTCGAAATTGGCATGCAATGTGTAGAACAACATGGTGTCTGCAGGCCAAGGATGCAGGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAAGGAACAGAAAATAAGCTAAAACCATCATCAGCATCATCATCATCATTTTCAGGTAGTAGTAGTTCAAAGCCACATTCTTCACGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACGTGTCAAATAGTTGCCTTCCATCAGCTAGATAA 1857 0.3926 MDLSSLFLLLIPLLTSFSVCQLEEFVSIDCGGTSNYTDNSTGLTWISDSGTMQHGISVEVEIPNGRSMVQYQKRRDFPIDNSKKYCYTLSTEERRRYLVRATFQYGSLDSGNTYPQFQLYLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRILSRRNVKGEIPPELSNMEALTELWLDGNLLTGQLPDMSKLVNLKIVHLENNKLTGRLPSYMGSLPSLEAFYDGNPELYRGKKKQHFKMVVGISIGVLVILLILFLVSLVLLLNTRRKASQKKREEKAGISGRTNSKPLTGYSFLRGGNLMDENTTCYITLSELTEATDNFSKKIGKGSFGSVYYGKMKDGKEIAVKSMNESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGSLRDHIHESSKKKNLDWLARLHIAEDAAKVYCKILTHLSSTISQRSNVLQARSLTRKGDAMSIIDPSLDGNAKTESIWRVVEIGMQCVEQHGVCRPRMQEIILAIQDAIKIEKGTENKLKPSSASSSSFSGSSSSKPHSSRKTLLTSFLEIESPDVSNSCLPSAR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1592 618 ProSiteProfiles Protein kinase domain profile. 374 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1592 618 Gene3D Ribonuclease Inhibitor 167 292 IPR032675 -
Aed5g1592 618 SUPERFAMILY Protein kinase-like (PK-like) 360 482 IPR011009 -
Aed5g1592 618 PANTHER OS07G0107800 PROTEIN-RELATED 503 575 - -
Aed5g1592 618 PANTHER OS07G0107800 PROTEIN-RELATED 207 485 - -
Aed5g1592 618 PANTHER OS07G0107800 PROTEIN-RELATED 19 183 - -
Aed5g1592 618 MobiDBLite consensus disorder prediction 571 596 - -
Aed5g1592 618 Pfam Malectin-like domain 28 205 IPR024788 -
Aed5g1592 618 SUPERFAMILY L domain-like 207 277 - -
Aed5g1592 618 PANTHER OS07G0107800 PROTEIN 503 575 - -
Aed5g1592 618 PANTHER OS07G0107800 PROTEIN 207 485 - -
Aed5g1592 618 PANTHER OS07G0107800 PROTEIN 19 183 - -
Aed5g1592 618 Gene3D Transferase(Phosphotransferase) domain 1 483 580 - -
Aed5g1592 618 MobiDBLite consensus disorder prediction 569 596 - -
Aed5g1592 618 Gene3D Phosphorylase Kinase; domain 1 354 449 - -
Aed5g1592 618 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Aed5g1592 618 Pfam Protein tyrosine and serine/threonine kinase 376 482 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1592 Aed-Chr5 20163055 20168051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1592 207 618 Receptor kinase-like Gene Family AT1G67720 45.785 2.86e-113 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aed5g1592 Malectin_like 2.6e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1592 - - gmx:100809222 469.159