Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1579 ATGAAGGAGGAGTCACGTGATGCTATTGCCAAGCCTATCCGTGTGGGAAGATATGAACTAGGTCGAACCCTGAGCGTTGGAAACCTGTGCATGGTGAAGCTTGCACGTGACGTTATCACCGGATACCCTCTACTCATCAAAATGCTCCACAAACAAACACTTCTCACCAACCATATCATGGACCTGACAAACAGCAGGAGACTGACAGAACTAGAGGCAAGAAAATATTTTCAGCAGCTCATATCTGCTGTGGCTTGCTGTCACAGTAAAGGTGTTTCCCATGGAAACTTAAAGCCAGAGAATTTGTTGTTGGATGCTGAAGGAGTGCTTAAAGTATCAGATTTTGGAATGAATGCACTGTCTCAACAAGATCAACTACAACAAGATGGGAAGCTTCACACACCATACACTACCCCACATTATATGGCCCCAGAGACTTGCCAGGGTGATTTTGCATGTCCTTCATTTTTTTCTCCAAGTGTAGAGAGACTAATTAAGAGAATCCTTGACCCCAGTCCTGCTACAGTACTTGTTAAAAGGGAAACAAGGTTCATGTCCAAATGTTCTGCGAATGAGATAATTTCAGGAATTGAACATACTGTAGCGTCTATGGGTTTTAATGTCAAGAAGAGAAAGTATAAGGTAAGAATTCTTTTTGTCTCTGACACATGCATGCATTTCAATTTCAAAATAATATCATTGTTTGCGACTGAGCCAGTAGTATCCTTTTCTACAAGGATCTTTCTGCTGGGCTGCAAGATATCATTTGGAAAGAAGAGTCCGTCAACACAGAAAAAGATGGTTAGTTACTTAGTTTCTCTGTGCAATGCTTTTTTTATATTTTTGGGAAGTATTTTATCTAAGCATAATGTTACAAAGTTCTAA 885 0.4023 MKEESRDAIAKPIRVGRYELGRTLSVGNLCMVKLARDVITGYPLLIKMLHKQTLLTNHIMDLTNSRRLTELEARKYFQQLISAVACCHSKGVSHGNLKPENLLLDAEGVLKVSDFGMNALSQQDQLQQDGKLHTPYTTPHYMAPETCQGDFACPSFFSPSVERLIKRILDPSPATVLVKRETRFMSKCSANEIISGIEHTVASMGFNVKKRKYKVRILFVSDTCMHFNFKIISLFATEPVVSFSTRIFLLGCKISFGKKSPSTQKKMVSYLVSLCNAFFIFLGSILSKHNVTKF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1579 294 Pfam Protein kinase domain 55 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1579 294 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 59 147 - -
Aed5g1579 294 PANTHER - 59 147 - -
Aed5g1579 294 Pfam NAF domain 180 210 IPR004041 GO:0007165
Aed5g1579 294 Gene3D Transferase(Phosphotransferase) domain 1 55 151 - -
Aed5g1579 294 SMART serkin_6 18 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1579 294 ProSiteProfiles Protein kinase domain profile. 1 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1579 294 Gene3D Kinase associated domain 1, KA1 155 244 - -
Aed5g1579 294 SUPERFAMILY Protein kinase-like (PK-like) 13 174 IPR011009 -
Aed5g1579 294 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 178 217 - -
Aed5g1579 294 PANTHER - 178 217 - -
Aed5g1579 294 PANTHER - 14 59 - -
Aed5g1579 294 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 14 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1579 Aed-Chr5 20053796 20056825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1579 177 217 CBL-interacting serine-threonine protein kinases AT1G01140 53.659 2.54e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed5g1579 Pkinase 2.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1579 - - gmx:100820011 157.918