Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g1578 | ATGGAGCATGGTAGCAGTAGTAATAGTTATAATCCAGTTGAAGAATTAGTTGGTAGAAGTATCGTTGTGGAAGGAAAATACGCACTGGAACGGACCCTGGGCGAGGGAAGCACCTCCGTCGTAAGACTTGCACGTAACGTTGCCACCGGACGCCAAGTCGCCATCAAGATTCTCGACAAGTTTCGCATTCTCGCTGAGCGAATGACCCCTCTCAGGAAACAGAAGAAAGCCGCGGTTGAAAGAGAAATATCAATAATGAAAATGCTTAGACACCCCAATGTCGTGCGTATAATTGAGGTGATGAATACGACGACAAAGGTTTATATTGTAATGGAACTTGTAAGTGGTGGTGGACCACTCATTGATCAAATTGGAGTGGGATTGACAGAAGACCATGCAAGAAGCTATTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCACCGTAGAGGTGTCACCCACAGAGACTTAAAGCCGGCGAATTTGTTGGTAGACGCTAATGGAGTGCTTAAAGTGACAGATTTTGGAATGAGTGCACTGCCCCAACAAGTTAAACAAGATGGGCTGCTTCACACTGGATGTGGTACGCTACATTATACAGCTCCAGAGATTCTCCAGGCTGAATTCAACTGTCCTCCATTTTTCTCTGCAAGTTTAATTAGACTGATTAGGAGAATCCTTGATCCCGAACCTGCTACACGGATTACAATGAATGAGATCTTTGAGGATGAATGGTTCATGAAGGATTATAAACCTCCTAGATTTTCTCGGGAAAATATTAGTTTTGATGATGATTCACAAAATCTTGTTGCTGAGGGGGATAAAGCAAGTTCTTCATCACCAGTGCCAGTGGGCATGAATGCATTTGAGATTTTGAATACATTTCTGGGCTACAACCTTCTTGAAAATCTTTTCAACCAGGAACAACATGTTAAAAGGGAAACAAGATTCATGTCCCAAAATCCCGTGGGTGAGATAATTGCAGGAATTGAGCTTGTTGCAGGGAATTTGAGATTTGAAGTTAAGAAGAGAAGCAATTATCAGAATTCTAATGGGTTGTTTGTCTTAAATTTAGGTGCAGGGTCCGAGTACAACTTCAACATAATTTGTTTGTAA | 1116 | 0.4194 | MEHGSSSNSYNPVEELVGRSIVVEGKYALERTLGEGSTSVVRLARNVATGRQVAIKILDKFRILAERMTPLRKQKKAAVEREISIMKMLRHPNVVRIIEVMNTTTKVYIVMELVSGGGPLIDQIGVGLTEDHARSYFQQLICAVDYCHRRGVTHRDLKPANLLVDANGVLKVTDFGMSALPQQVKQDGLLHTGCGTLHYTAPEILQAEFNCPPFFSASLIRLIRRILDPEPATRITMNEIFEDEWFMKDYKPPRFSRENISFDDDSQNLVAEGDKASSSSPVPVGMNAFEILNTFLGYNLLENLFNQEQHVKRETRFMSQNPVGEIIAGIELVAGNLRFEVKKRSNYQNSNGLFVLNLGAGSEYNFNIICL | 371 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g1578 | 371 | PANTHER | SERINE/THREONINE KINASE | 23 | 206 | - | - | |
Aed5g1578 | 371 | PANTHER | SERINE/THREONINE KINASE | 204 | 345 | - | - | |
Aed5g1578 | 371 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 257 | IPR011009 | - | |
Aed5g1578 | 371 | ProSiteProfiles | Protein kinase domain profile. | 27 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed5g1578 | 371 | Pfam | Protein kinase domain | 27 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed5g1578 | 371 | SMART | serkin_6 | 27 | 246 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed5g1578 | 371 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 23 | 23 | 206 | - | - | |
Aed5g1578 | 371 | Gene3D | Kinase associated domain 1, KA1 | 284 | 368 | - | - | |
Aed5g1578 | 371 | ProSitePatterns | Protein kinases ATP-binding region signature. | 33 | 56 | IPR017441 | GO:0005524 | |
Aed5g1578 | 371 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 23 | 204 | 345 | - | - | |
Aed5g1578 | 371 | Gene3D | Transferase(Phosphotransferase) domain 1 | 21 | 206 | - | - | |
Aed5g1578 | 371 | Gene3D | Transferase(Phosphotransferase) domain 1 | 207 | 275 | - | - | |
Aed5g1578 | 371 | Pfam | NAF domain | 284 | 343 | IPR004041 | GO:0007165 | |
Aed5g1578 | 371 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 152 | 164 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g1578 | Aed-Chr5 | 20048617 | 20052192 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g1578 | 25 | 348 | CBL-interacting serine-threonine protein kinases | AT1G01140 | 47.043 | 3.30e-105 | 315 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Aed5g1578 | Pkinase | 3.8e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g1578 | - | - | adu:107482008 | 327.791 |