Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1557 ATGAGGAAGAATTGCAACTTGGAACTTTGCCTTTTCCCTCCTTCCCTCTCCGATCTTCGCCCCATGATGGAAGCAGAAGTGAGTGAGAGCCCACAACAACAGGAACAGGACCAACACCATCAACAGCAACACCGACCGCAACATCCGCTGACCATTTTCTATGATGGCAAGATTTCTGTTTCGGATGTCACGGAGCTTCAGGCCAGGTCCATATTAATGCTAGCAAATAAGGAGATGGAGATGGAGAAAAGATCAGTTATGACACCAACTGGGTCATCAGAACCATGTTCACCAATATTATCACTGCAATCACCTCATAATAATAATAATAATAACAACATGGTGTATAGCCCCGGTGGCACTGGACTTTCCATGAAGAGATCGCTGCAGAGGTTTCTCCAGAAGAGGAAGAATCGTGTCCAAGAAACATCATCCCCATACCATCATTAG 450 0.4533 MRKNCNLELCLFPPSLSDLRPMMEAEVSESPQQQEQDQHHQQQHRPQHPLTIFYDGKISVSDVTELQARSILMLANKEMEMEKRSVMTPTGSSEPCSPILSLQSPHNNNNNNNMVYSPGGTGLSMKRSLQRFLQKRKNRVQETSSPYHH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1557 149 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Aed5g1557 149 PANTHER - 1 149 - -
Aed5g1557 149 Pfam Jas motif 126 147 IPR018467 -
Aed5g1557 149 MobiDBLite consensus disorder prediction 82 109 - -
Aed5g1557 149 SMART tify_2 43 77 IPR010399 -
Aed5g1557 149 MobiDBLite consensus disorder prediction 86 109 - -
Aed5g1557 149 MobiDBLite consensus disorder prediction 25 47 - -
Aed5g1557 149 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 149 IPR040390 -
Aed5g1557 149 Pfam tify domain 47 76 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1557 Aed-Chr5 19884897 19887135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1557 1 148 Tify Gene Family AT1G30135 39.869 4.83e-21 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed5g1557 tify 6.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1557 - - gmx:100305565 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1557 5 19884897 19887135 Aed5g1557 5 19884897 19887135 ECH