Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1551 ATGAAGAGGGAGCGCGAGCAGCTTGGTTCCAACGCAGGGACCTCAAGCTGCGGATACTCGAGCGGAAAATCGAACCTTTGGGGTGAGGAGGAAGGAGGCATGGACGAGCTTCTCGCGGTGGTGGGTTACAAGGTGCGCTCATCGGACATGGCCGAAGTGGCGCAGAAGCTGGAGCGCCTCGAAGAAGCCATGGGAAGTGGCCAAGACGAAGACCTAACGGAGCTTTCAAACGACGTCGTTCATTACAACCCTTCCGACATCTCCACCTGGCTCGAAACCATGCTTTCCAATTTCGACTCTCTCCCCTCCGAAGAACCGTTAAAGGACTCCGCCTCCTCCGACTACGATCTCAAGGCTATTCCGGGGAAGGCAATATACGGTGGCGGTGTCGACGCGCCCGCCTCGCTGCCTAACCCTAAGCGCGTGAAGACTGAAGAGTCAACGCGCGCGGTGCTGGTCGTTGACTCGCAGGAGAACGGGATCCGCCTCGTGCACAGCCTCATGGCCTGCGCGGAGGCCGTGGTGAGCAACAACCTCGTCGTGGCGGAGGCGCTGGTCAAACAGATCGGCTTCCTCGCCGTCTCGCAGGTCGGAGCTATGAAGAAAGTCGCCACCTTCTTCGCCGAAGCGCTCGCCAGGCGAATCTACAGAGTGTCCCCTCAGCAGCACTCTCTCTCCGACACGTTTCAGATTAACTTCTATGAGACCTGTCCTTACTTCAAGTTCGCGCACTTCACCGCCAACCAGGCGATTCTCGAAGCGTTCCAGGGGAAGAGCCGCGTCCACGTCATCGATTTCGGGATCAACCAGGGGATGCAGTGGCCGGCGCTGATGCAAGCCCTTGCCGTCCATCCCGATGGTCCTCCCGCTTTCCGCCTCACCGGAATCGGTCCTCCGGCGGCGGACAACTCCGACCACCTCCAGGAGGTAGGGTGGAAGCTCGCGCAGCTGGCGGAGACGATTCACGTGCAGTTCGAGTACCGCGGCTTCGTCGCGAACAGCCTCGCGGATCTCGATGCCTCCATGCTCGACCTGAGGGAAGACGAGTCCGTCGCGGTGAACTCCGTCTTCGAGTTTCACAAGCTCCTCGCCCGCCCCGGCGCCGTGGAGAAGGTTCTCTCCGTCGTGCGGCAGATTCGGCCGGTGATCCTCACCGTCGTCGAGCAAGAAGCGAACCACAACGGACCGAGTTTTCAGGAACGGTTCAATGAGTCACTGCACTATTACTCAACTCTATTTGACTCGATGGAGGGTTCGCCTGTGGACCCGAATGACAAGGCTTTGTCGGAGCTTTACTTAGGGAATCAAATCTGTAACGTGGTGGCGTGCGAGGGAATGGAGCGCGTGGAGAGGCACGAGACGCTGGGCCAGTGGCGCAGCCGGTTCGGTTCGGCCGGGTTTTCTGCGGTTCATTTGGGTTCGAAAGCGTACAAGCAGGCCAGCATGTTGCTCGCGCTTTCCGCGGGTGGGGATGGGTATATGGTGGACGAAAACAATGGCTGTCTCATGCTGGGATGGCACACTAGGCCCTTGATTACCACCTCCGCGTGGCAACTCGCTGAATAA 1566 0.5939 MKREREQLGSNAGTSSCGYSSGKSNLWGEEEGGMDELLAVVGYKVRSSDMAEVAQKLERLEEAMGSGQDEDLTELSNDVVHYNPSDISTWLETMLSNFDSLPSEEPLKDSASSDYDLKAIPGKAIYGGGVDAPASLPNPKRVKTEESTRAVLVVDSQENGIRLVHSLMACAEAVVSNNLVVAEALVKQIGFLAVSQVGAMKKVATFFAEALARRIYRVSPQQHSLSDTFQINFYETCPYFKFAHFTANQAILEAFQGKSRVHVIDFGINQGMQWPALMQALAVHPDGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVQFEYRGFVANSLADLDASMLDLREDESVAVNSVFEFHKLLARPGAVEKVLSVVRQIRPVILTVVEQEANHNGPSFQERFNESLHYYSTLFDSMEGSPVDPNDKALSELYLGNQICNVVACEGMERVERHETLGQWRSRFGSAGFSAVHLGSKAYKQASMLLALSAGGDGYMVDENNGCLMLGWHTRPLITTSAWQLAE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1551 521 MobiDBLite consensus disorder prediction 8 23 - -
Aed5g1551 521 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Aed5g1551 521 Pfam GRAS domain family 163 518 IPR005202 -
Aed5g1551 521 PANTHER DELLA PROTEIN GAI1-RELATED 2 124 IPR030006 GO:0003712|GO:0005634
Aed5g1551 521 PANTHER DELLA PROTEIN GAI1-RELATED 149 519 IPR030006 GO:0003712|GO:0005634
Aed5g1551 521 Gene3D - 33 98 IPR038088 -
Aed5g1551 521 SMART DELLA_2 35 108 - -
Aed5g1551 521 Coils Coil 50 70 - -
Aed5g1551 521 ProSiteProfiles GRAS family profile. 154 518 IPR005202 -
Aed5g1551 521 MobiDBLite consensus disorder prediction 1 28 - -
Aed5g1551 521 Pfam Transcriptional regulator DELLA protein N terminal 35 101 IPR021914 -
Aed5g1551 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 124 IPR005202 -
Aed5g1551 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 149 519 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1551 Aed-Chr5 19812856 19814421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1551 23 520 GRAS Transcription Factor Family AT1G14920 65.849 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed5g1551 GRAS 1.8e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1551 K14494 - gmx:547718 906.36