Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1546 ATGTCAGAGGTTTGGCATCTTATGAAGAAATCACTTCATTGCAAACCTCATTCATCAGAAGTTCATGATCCGAAGGCACATAGCAATACTCCAAGAGAACCAGAAGACAAGATTAACACTCGGGGACACTCAGAAGATCATGTTAGTCATGAAATTTTTCTTGACAAATCAAGTGGTGAGATTAAGATTTGTCCATGCTGTCCTTGTTCTCATCAAGACAGTGAAGATGAAAAAAGTGTACAAGAACCTCATCTTCCTAGATCAACCAAGAGAATTATACCTTCATCAAAAACACATTATGTTGATTGTGATGAATGCAATGTTTTCTCAAAGAAAAAAGTGCCACAGAAGAAAGATCTCCCAATCGCAACTCGTCAACATGAACGTGAAGAGAAACTAAAATCTATTGACAGTTTGGAAGAACATGATCATAATATCCCTGGACATTCAGTGATCCAACTTGAAAGAGAAGGTTCATCAGCTTGCAAGATCATCAAACAAATATGCAAAGATAAGTTGATCGAAAGCAAGGCAACACATATTGAATGTGTCTTGAGAGTCCAGAACAAGCAAGAAACGTTTGCATGCTTTGAGGAGTGTAGGGAAATGGTAAGGACTAAAGTTGAAAAGCTACAAAATGAGCACCCAAGATGTTTGGTTGATGGAAATGAGCTATTGAGATTTCATGGTACAACAATTGCATGTTCCCTTGGTTTAAATGGCTCTTCTACCCTTTGTACCTCAGACCAATGTGGTGTGTGTCAAATTCTAAGGCATGGTTTCTCTGCTAACCAAGAGTTTCATGGGACACTTGGGGTTTATACTACTTCTACTAGTGGAAAAGCCATTGCTTCTATTTGCTCATCCAATATATCTGTTCAGAGAATGTGTGTTATGCTGTGTAGAGTAATAGCTGGAAGGATTAACAATCCTCTACAAGAGATCAAGGAAATTACTGATTCTGGGTTTGATTCTTTGGTAAAGACAATGAGTGACCTATCAGATATTGAAGAACTCATTGTTTTAAATCCTAGAGCTGTGCTCCCTTGCTTTTTGGTAATCTACACTTTCTGA 1074 0.3799 MSEVWHLMKKSLHCKPHSSEVHDPKAHSNTPREPEDKINTRGHSEDHVSHEIFLDKSSGEIKICPCCPCSHQDSEDEKSVQEPHLPRSTKRIIPSSKTHYVDCDECNVFSKKKVPQKKDLPIATRQHEREEKLKSIDSLEEHDHNIPGHSVIQLEREGSSACKIIKQICKDKLIESKATHIECVLRVQNKQETFACFEECREMVRTKVEKLQNEHPRCLVDGNELLRFHGTTIACSLGLNGSSTLCTSDQCGVCQILRHGFSANQEFHGTLGVYTTSTSGKAIASICSSNISVQRMCVMLCRVIAGRINNPLQEIKEITDSGFDSLVKTMSDLSDIEELIVLNPRAVLPCFLVIYTF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1546 357 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 356 - -
Aed5g1546 357 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 356 - -
Aed5g1546 357 SUPERFAMILY ADP-ribosylation 157 356 - -
Aed5g1546 357 MobiDBLite consensus disorder prediction 13 46 - -
Aed5g1546 357 Gene3D - 145 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1546 Aed-Chr5 19780977 19782666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1546 127 354 C2H2 Transcription Factor Family AT5G54630 44.770 7.41e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1546 - - gmx:102660699 598.586