Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1514 ATGGAGAACAACCATGTTCAGCTTTTGCCTCATCTCACTGTGGCACTTGTTCTTGTTGTGATCACTGTTTTGTTTCCTTTGACCACTGAAGGTGCAGCAGTTTCTTCCTCCATCAAGACTGATGCACAGGCTCTTTTCATGTTCAAAAGGACGGTTCAGAAGGATCCAAGTGGAGTTTTGTCAGGGTGGAAGCTGAATAGGAATCCATGCAGCTGGTATGGAGTCACTTGCACCCTTGGAAGAGTTACTCAGCTTGAAATTAGTGGAAGTAATACCCTTGCTGGCACGATTTCTCTTGATCCTTTGTCTTCTTTAGATATGTTGTCTGTTCTCAAATTGTCTTTGAATTCTTTTTCTGTAAATTCCACCTCTTTGCTTAATCTCCCATATAGTTTGACACAGCTTGATCTATCCTTTGGTAGAGTCACAGGTCCTGTCCCCGAGAACCTTTTCTCCAAGTGTCCAAATCTTGTTGTTGTGAATCTTTCTTACAACAACTTGACAGGCCCTATTCCTGAAAATTTCTTTCACAATTCTGATAAACTGCAGATCCTTGACCTCTCTTCCAACAACCTTTCAGGCCCAATTTTTGGCCTCAAAATGGAGTGCATTTCCTTGTTGCAACTTGATCTATCTGGAAACCGTTTATCAGACTCAATTCCACTCTCTTTGTCAAACTGCACCAGCCTTAAGAGTTTGAATTTAGCCAACAATATGATTTCTGGGGATATTCCCAAAGCTTTGGGTCAGCTAAACAAACTACAGACTTTGGATCTTTCCCACAACCAACTCACTGGTTGGATCCCTTTTGAATTGGGAAATGCATGTGCTTCCCTTTTGGAGCTTAAACTTTCTTTCAACAACATCTCAGGCTCAATCCCATCTGGTTTCTCTTCTTGCACTTGGCTTCAACTTCTTGACATGTCTAACAACAACATGTCAGGGCAGTTACCAGATGCAATCTTTCAGAACCTTGGATCATTACAGGAACTGAGGCTGGGAAATAATGCTATCACTGGTCAATTTCCGTCTTCAATATCTTCCTGCAAAAAATTGAAGATTGTAGATTTCAGCTCAAATAAAATTTATGGATCTCTCCCCGGAGATTTATGTCCAGGAGCAGCCTCACTTGAGGAGCTGAGAATGCCAGATAATCTCATTACAGGAGAAATCCCAGCTGAACTGTCAAAGTGCTCACAGCTGAAGACACTTGATTTCAGTCTGAACTATCTCAATGGTACAATTCCTGATGAGCTTGGAGAACTTGAAAACCTTGAGCAGCTAATAGCATGGTTCAATGGCTTGGAAGGAAGAATTCCACCAAAGTTGGGGCAGTGTAAGAATCTTAAGGATCTCATACTGAATAATAATCACCTCACAGGTGGAATTCCTATTGAGTTGTTCAACTGCAGCAATCTTGAATGGATATCACTGACAAGCAATGAACTCGGGGGCGAAACACCGCGCGAGTTTGGCCTTTTGACAAGGTTAGCAGTTTTGCAGCTTGGAAACAACAGCCTGACTGGGGAGATACCATCAGAACTAGCAAATTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACTGGAGAGATCCCTCCAAGACTTGGAAGGCAGCTAGGAGCAAAATCCTTGTTTGGTATCCTTTCAGGGAACACTTTGGTGTTTGTAAGAAATGTTGGAAATTCATGTAAAGGAGTTGGAGGTCTGCTAGAATTCTCCGGTATTCGGCCTGAAAGACTCTTGCAGGTGCCGACATTGAGGACTTGTGATTTCACAAGACTCTATTCTGGTCCTGTCCTCAGCCTGTTCACCAAGTACCAGACTCTGGAGTATCTTGATCTCTCCTACAACCAGCTTCGCGGAAAAATCCCAGATGAATTTGGAGATATGGTGGCTTTACAGGTTCTTGAACTATCTCACAATCAGCTGTCTGGAGAAATCCCTTCATCACTTGGCCAGCTCAAGAATTTGGGCGTGTTTGATGCATCATACAATAGATTCCAGGGTCATATCCCAGACTCATTCTCAAACCTCTCATTCTTAGTGCAAATTGATCTATCTAACAATGAGTTAACTGGGCAGATTCCATCTAGGGGACAACTAAGTACACTTCCAGCTTCTCAGTATGCAAATAATCCAGGCCTTTGTGGTGTACCATTGCCTGATTGCAAGAATGACAACCCCCAAACCACAACAAATCCAAGTGATGATGTTAGCAAAGGTGGCCACAAAACAGCAACTGCAACATGGGCAAACAGCATTGTCATGGGAATTCTCATCTCTGTTGCTTCTGTGTGTATCTTAATTGTGTGGGCAATTGCAATGCGTGCAAGGAGGAGGGAGGCTGAGGAAGTCAAGATGCTCAATAGCTTGCAAGCATGCCATGCTGCTACAACATGGAAGATTGACAAAGAGAAAGAGCCCCTAAGCATTAATGTGGCTACATTTCAGAGGCAGCTGAGGAAGCTCAAGTTCTCACAGCTGATTGAAGCAACTAATGGCTTCTCAGCAGAAAGCCTCATTGGGTGTGGTGGTTTCGGTGAAGTGTTCAAGGCCACACTCAAAGACGGCTCAAGTGTCGCCATAAAGAAGCTCATTCGACTGAGCTGTCAGGGCGATCGAGAGTTCATGGCAGAGATGGAAACCTTAGGGAAGATCAAGCACAGAAACCTTGTCCCTTTGTTGGGGTACTGCAAAGTAGGGGAAGAGAGGCTCCTTGTTTATGAGTACATGGAGTATGGAAGCCTAGAAGAGATGCTTCATGGGAGAATCAAGACGCGTGATCGACGCATTTTGACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCCAAAGGGCTTTGTTTCCTGCACCACAATTGCATCCCTCACATCATACACAGAGACATGAAATCAAGCAATGTGCTACTTGACCATGAAATGGAGTCAAGGGTCTCAGATTTTGGCATGGCAAGACTAATAAGTGCCCTTGACACACATCTTAGTGTGAGCACACTAGCAGGAACACCTGGATATGTTCCCCCAGAGTACTACCAAAGCTTCAGGTGCACTGCCAAGGGAGATGTTTACTCATTTGGAGTTGTGATGTTGGAACTGCTTAGTGGAAAACGCCCTACTGACAAGGAGGATTTTGGTGACACCAACTTGGTGGGGTGGGCGAAGATGAAGGTCCGCGAAGGGAAGCCAATGGAAGTGATTGACAGTGACTTGCTCTTGGCCACTCAAGGAACTGATGAAGCAGAAGCCAAAGAAGTGAAGGAGATGATAAGATATTTGGAGATTACTTTGAAGTGTGTTGATGACTTGCCTTCAAGAAGGCCAAACATGTTGCAGGTAGTGGCCAATCTGAGAGAGCTTATGCCTGGATCAACTGATGGAAGCAGCAACAGTGCTTGA 3411 0.4433 MENNHVQLLPHLTVALVLVVITVLFPLTTEGAAVSSSIKTDAQALFMFKRTVQKDPSGVLSGWKLNRNPCSWYGVTCTLGRVTQLEISGSNTLAGTISLDPLSSLDMLSVLKLSLNSFSVNSTSLLNLPYSLTQLDLSFGRVTGPVPENLFSKCPNLVVVNLSYNNLTGPIPENFFHNSDKLQILDLSSNNLSGPIFGLKMECISLLQLDLSGNRLSDSIPLSLSNCTSLKSLNLANNMISGDIPKALGQLNKLQTLDLSHNQLTGWIPFELGNACASLLELKLSFNNISGSIPSGFSSCTWLQLLDMSNNNMSGQLPDAIFQNLGSLQELRLGNNAITGQFPSSISSCKKLKIVDFSSNKIYGSLPGDLCPGAASLEELRMPDNLITGEIPAELSKCSQLKTLDFSLNYLNGTIPDELGELENLEQLIAWFNGLEGRIPPKLGQCKNLKDLILNNNHLTGGIPIELFNCSNLEWISLTSNELGGETPREFGLLTRLAVLQLGNNSLTGEIPSELANCSSLVWLDLNSNKLTGEIPPRLGRQLGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNQLRGKIPDEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASYNRFQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPDCKNDNPQTTTNPSDDVSKGGHKTATATWANSIVMGILISVASVCILIVWAIAMRARRREAEEVKMLNSLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVREGKPMEVIDSDLLLATQGTDEAEAKEVKEMIRYLEITLKCVDDLPSRRPNMLQVVANLRELMPGSTDGSSNSA 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1514 1136 SUPERFAMILY L domain-like 63 319 - -
Aed5g1514 1136 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Aed5g1514 1136 Gene3D Transferase(Phosphotransferase) domain 1 915 1133 - -
Aed5g1514 1136 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 29 1124 - -
Aed5g1514 1136 SUPERFAMILY Protein kinase-like (PK-like) 820 1121 IPR011009 -
Aed5g1514 1136 Gene3D Phosphorylase Kinase; domain 1 799 914 - -
Aed5g1514 1136 PRINTS Leucine-rich repeat signature 182 195 - -
Aed5g1514 1136 PRINTS Leucine-rich repeat signature 251 264 - -
Aed5g1514 1136 ProSiteProfiles Leucine-rich repeat profile. 205 226 IPR001611 GO:0005515
Aed5g1514 1136 SUPERFAMILY RNI-like 488 702 - -
Aed5g1514 1136 CDD STKc_IRAK 845 1124 - -
Aed5g1514 1136 Pfam Protein tyrosine and serine/threonine kinase 842 1121 IPR001245 GO:0004672|GO:0006468
Aed5g1514 1136 ProSitePatterns Protein kinases ATP-binding region signature. 845 868 IPR017441 GO:0005524
Aed5g1514 1136 ProSiteProfiles Protein kinase domain profile. 839 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1514 1136 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 29 1124 - -
Aed5g1514 1136 SUPERFAMILY RNI-like 244 537 - -
Aed5g1514 1136 SMART serkin_6 839 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1514 1136 SMART LRR_typ_2 494 518 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 447 470 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 634 658 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 422 446 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 154 178 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 325 349 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 203 227 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 251 275 IPR003591 -
Aed5g1514 1136 SMART LRR_typ_2 519 542 IPR003591 -
Aed5g1514 1136 ProSiteProfiles Leucine-rich repeat profile. 253 274 IPR001611 GO:0005515
Aed5g1514 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672|GO:0006468
Aed5g1514 1136 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Aed5g1514 1136 Pfam Leucine rich repeat 606 647 IPR001611 GO:0005515
Aed5g1514 1136 Pfam Leucine rich repeat 131 192 IPR001611 GO:0005515
Aed5g1514 1136 Pfam Brassinosteroid receptor island domain 549 607 IPR045381 -
Aed5g1514 1136 Gene3D - 552 608 - -
Aed5g1514 1136 MobiDBLite consensus disorder prediction 728 747 - -
Aed5g1514 1136 Gene3D Ribonuclease Inhibitor 80 727 IPR032675 -
Aed5g1514 1136 MobiDBLite consensus disorder prediction 727 747 - -
Aed5g1514 1136 Pfam BspA type Leucine rich repeat region (6 copies) 295 386 IPR026906 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1514 Aed-Chr5 19499715 19503125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1514 14 1124 Receptor kinase-like Gene Family AT1G55610 47.788 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Aed5g1514 PK_Tyr_Ser-Thr 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1514 - - gmx:100789959 2122.44