Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1504 ATGGTTTTTCCAAGACACCCTTCAGAGTCTGATCTCTTTCTTCAATCTAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCCAGGTTCAGCATGCCCGAGAACTCAATGCCTAAGGAAGCTGCGTACCAGAACATACACGATGAGTTGCAGCTTGATGCTATTCCAAAGCTGAACTTGGCTTCGTTTGTGACAACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCTATTAACAAAAACTATGTCGACATGGACGAGTATCCTGCCACCACTGACCTTCATAATCGGTGCGTGAACATGATAGCACGTATGTTCCATGCTGAAATTGGAGAAAATGAGAATGCAGTTGGAGCAGGAACTGTTGGATCATCAGAGGCTATAATGCTGGCTGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGCAAGGCAGAGGGAAAGCCCTATGATAAGCCCAACTTGGTGACTGGTTCCAATGTACAGGTCTGTTGGGAGAAATTTGCTAGGTATTTTGAGGTTGAGTTGAGAGAAGTTGAAGTCAGAGAAGGCTACTACGTCATGGACCCTGCCAAAGCAGTTGAACTGGTTGACGAGAACACTATTTGTGTGGCTGCTATCTTGGGTTCAACTTACAATGGTGAGTTCGAAGATGTCAAGCTCTTAAATGACTTGCTGCTACAAAAAAACAAACAAACCGGATGGGATACCCCTATTCATGTGGATGCTGCTAGTGGTGGCTTTATTGCTCCTTTCCTTTACCCAGAGCTAGAATGGGATTTCAGACTCCCATTGGTGAAAAGCATTAATGTTAGTGGCCACAAATATGGACTTGTTTATGCTGGCATTGGTTGGGTTATTTGGAGAACCAAGGATGACTTGCCAGAAGACCTTGTCTTCCATATTAATTACCTTGGAGCTGACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAACTTATTCGCCTTGGCCAAGAGGGATACCGTAGTATAATGGAGAACTGCCATGAAAATGCAATGGTGCTGAAGGAAAACTTGGAGAAGAGTGGACGCTTCAACATACTCTCAAAAGACAACGGTGTTCCAGTAGTGGCATTTTCTCTGAAAGACAGAAGCCAGTACGACGAGTTCAAAATATCAGAAATGTTGCGGCGCCACGGCTGGATCGTGCCGGCATATCCAATGCCACCAGCTGCTCAACACATCAATGTGCTCCGTGTGGTCATCAGGGCTGAGTTTTCACGCACCCTTGCTGAACGCCTTGTGTTTGACATATACAATGTGCTGCATGAACTTGAAAAACTACATCCTGCAAAAGTGACCATCATTAAGGAGGATAACAATGCCTTGGTTGAAACTGGAATCAAGAACACTCACACTGCATTGGATGCACAGAGGGAAATCATTGCTCAAGAATCAAACAAGCGTCAGAAAATCATGGCTGCGTAG 1485 0.4478 MVFPRHPSESDLFLQSNFASRYARDSLPRFSMPENSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARMFHAEIGENENAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCHENAMVLKENLEKSGRFNILSKDNGVPVVAFSLKDRSQYDEFKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVFDIYNVLHELEKLHPAKVTIIKEDNNALVETGIKNTHTALDAQREIIAQESNKRQKIMAA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1504 494 PANTHER GLUTAMATE DECARBOXYLASE 1 493 - -
Aed5g1504 494 PANTHER GLUTAMATE DECARBOXYLASE 1 493 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed5g1504 494 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed5g1504 494 Gene3D - 66 360 IPR015421 GO:0003824
Aed5g1504 494 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aed5g1504 494 Gene3D - 361 447 - -
Aed5g1504 494 SUPERFAMILY PLP-dependent transferases 16 446 IPR015424 -
Aed5g1504 494 CDD DOPA_deC_like 59 437 - -
Aed5g1504 494 Gene3D - 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1504 Aed-Chr5 19369231 19371716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1504 1 482 Calmodulin-binding Proteins AT2G02010 75.726 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1504 K01580 - gmx:100782330 935.636