Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1503 ATGGTTTTTCCAAAACCCGCTTCTGAGTCTGACCTCTTTCTTCATTCCAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCCAGGTTCAGCATACCCGAGGACTCAATGCCTAAGGAGGCTGCGTACCAGAACATTCACGATGAGTTGCAGCTTGATGCCATTCCAAAGCTGAATTTGGCATCGTTTGTTACAACTTCCATGGAAGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTACGTTGACATGGACGAATATCCTATCACCACTGACCTTCACAATCGGTGCGTGAACATGATAGCACGATTGTTTCATGCTGAAATTGGAGAAAACGAGAATGCAGTTGGAGCAGGAACCGTTGGATCCTCAGAGGCCATAATGTTGGCGGGGCTTGCATTCAAGAAGAAATGGCAGAACAAGCGCAAGGCAGAGGGAAAGCCTTATGATAAGCCCAATTTGGTGACTGGTTCCAATGTTCAGGTCTGTTGGGAGAAATTTGCTAGATACTTTGAGGTTGAGTTAAGGGAAGTTGAAGTGAGAGAAGGCTACTACATCATGGACCCTGCCAAAGCAGTTGAAATGGTTGATGAGAACACTATCTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGTGAGTTTGAAGATGTCAAGCTTCTAAATGACCTACTGCTAATTAAAAACAAGCAAACTGGATGGGATACCCCTATTCATGTGGATGCTGCAAGTGGTGGCTTTATTGCTCCATTCCTATATCCAGAGCTAGAGTGGGATTTCAGACTCCCATTGGTGAAAAGCATAAATGTTAGTGGCCACAAGTATGGACTTGTTTATGCTGGCATTGGTTGGGTTATTTGGAGAACCAAGGATGACTTGCCAGAAGACCTTGTCTTCCATATCAATTACCTTGGAGCTGACCAACCAACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAACTTATTCGCCTTGGCCAAGAGGGGTACCGTAGCATAATGGAGAACTGCCATGAAAATGCAATGGTCCTGAAGGAAGATTTGGAGAAGAGTGGACTCTTTAACATTCTATCAAAAGACAATGGTGTTCCAGTGGTGGCATTTTCTCTGAAAGACAGAAGCCAGTACGATGAATTCAAGATATCAGAATTGCTGCGGCGCCACGGCTGGATCGTGCCGGCATATCCAATGCCACCTGCTGCTCAGCACATCAATGTGCTTCGTGTGGTGATCAGGGCAGAGTTTTCACGCACCCTTGCTGAACGCCTTGTGCTTGACATACACAGTGTGATGGATGAACTTGAAAAAATGCATCCACCCAAACCCATGGTGACCAAAAACAACACAAAGGAAGAGAACAAGGCATTGGTTGAAACTGCATTGGATGCACAGAGGGAAATCATTGCTCAAGAATCCAACAAGCGTCAGAAAATCATGGCTGCCTAG 1476 0.4499 MVFPKPASESDLFLHSNFASRYARDSLPRFSIPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHAEIGENENAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYIMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLIKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCHENAMVLKEDLEKSGLFNILSKDNGVPVVAFSLKDRSQYDEFKISELLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVLDIHSVMDELEKMHPPKPMVTKNNTKEENKALVETALDAQREIIAQESNKRQKIMAA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1503 491 PANTHER GLUTAMATE DECARBOXYLASE 1 490 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed5g1503 491 Gene3D - 361 448 - -
Aed5g1503 491 Gene3D - 66 360 IPR015421 GO:0003824
Aed5g1503 491 Coils Coil 456 476 - -
Aed5g1503 491 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed5g1503 491 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aed5g1503 491 Gene3D - 1 65 - -
Aed5g1503 491 PANTHER GLUTAMATE DECARBOXYLASE 1 490 - -
Aed5g1503 491 SUPERFAMILY PLP-dependent transferases 16 446 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1503 Aed-Chr5 19357318 19359849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1503 1 479 Calmodulin-binding Proteins AT5G17330 74.590 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1503 K01580 - gmx:100781791 917.146