Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1502 ATGGTTTTTCCAAGACCTCCTTCAGAGTCTGACCTCTTTCTTCATTCCAACTTTGCTTCTCGCTATGCCAGGGACTCTCTTCCCAGGTTCAACATGCCCGAGGACTCCATGCCTAAGGAGGCTGCGTACCAGAACATTCACGATGAATTGCAGCTAGATGCAATTCCAAAGCTGAACTTGGCTTCGTTTGTGACCACTTCCATGGAAGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAAAACTACGTCGACATGGACGAGTATCCTATCACCACTGACCTTCACAATCGGTGCGTGAACATGATAGCACGATTGTTTCATGCTGAAATTGGACAAAATGAGAATGCAATTGGAGCAGGAACCGTTGGATCTTCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAAAACAAGCGCAAAGCTGAGGGAAAGCCTTATGATAAGCCAAATTTGGTGACAGGTTCCAATGTGCAGGTATGTTGGGAGAAATTTGCTAGGTATTTTGAGGTTGAGTTAAGGGAAGTTGAAGTGAGAGAAGGCTACTACATCATGGACCCTGCCAAAGCAGTTGAAATGGTTGATGAAAACACTATCTGTGTGGCTGCTATCTTGGGTTCAACTTACAATGGTGAGTTTGAAGATGTCAAGCTTCTAAATGACCTACTGCTAATTAAAAACAAGCAAACTGGATGGGATACCCCTATTCATGTGGATGCTGCAAGTGGTGGTTTTATTGCTCCTTTCCTATATCCAGAGCTAGAATGGGATTTCAGACTCTCATTGGTGAAAAGCATAAATGTTAGTGGCCACAAGTATGGACTTGTTTATGCTGGCATTGGTTGGGTTATTTGGAGAACCAAGGATGACTTGCCAGAAGACCTTGTCTTCCATATCAATTACCTTGGAGCTGACCAGCCCACCTTCACTCTAAATTTTTCTAAAGGTTCTAGTCAAATCATTGCACAATATTATCAGCTAATTCGTCTTGGCCAGGAGGGGTACCGGGGCATAATGGAGAACTGCCATGAAAATGCAATGGTGCTGAAGGAAGATTTGGAGAAGAGTGGACTCTTCAACATACTCTCAAAAGACAATGGTGTTCCAGTGGTGGCATTTTCTCTGAAAGACAGAAGCCAGTATAATGAGTTCAAGATATCAGAGATGTTGCGGCGCCACGGCTGGATCGTGCCGGCATATCCAATGCCACCGGCTGCTCAACACATCAATGTGCTTCGTGTGGTGATCAGGGCAGAGTTTTCACGCACCCTTGCTGAACGCCTTGTGCTTGATATACACAGTGTGATGGATGAACTTGAAAAGGTGCATCCCCACAACAAAGTGACCAACAACAACACTAAGGAACAGAACAAGGCCTTGGTTGAAACTGCATTGGAAACCATTGCTCAGGAATCCAATAAGCATCGGAAAATCATTGTTGCCTAG 1461 0.447 MVFPRPPSESDLFLHSNFASRYARDSLPRFNMPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHAEIGQNENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYIMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLIKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLSLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRGIMENCHENAMVLKEDLEKSGLFNILSKDNGVPVVAFSLKDRSQYNEFKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVLDIHSVMDELEKVHPHNKVTNNNTKEQNKALVETALETIAQESNKHRKIIVA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1502 486 Gene3D - 361 447 - -
Aed5g1502 486 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aed5g1502 486 SUPERFAMILY PLP-dependent transferases 16 446 IPR015424 -
Aed5g1502 486 Gene3D - 66 360 IPR015421 GO:0003824
Aed5g1502 486 Gene3D - 1 65 - -
Aed5g1502 486 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aed5g1502 486 PANTHER GLUTAMATE DECARBOXYLASE 1 484 - -
Aed5g1502 486 PANTHER GLUTAMATE DECARBOXYLASE 1 484 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1502 Aed-Chr5 19352366 19354274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1502 1 447 Calmodulin-binding Proteins AT5G17330 79.418 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1502 K01580 - gmx:100781791 880.167