Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1486 CCTCGTTCTATCCCGCTACAAAGCCCTTTTTTCTACGGTCATCGTACCTGGTTCGTTCACAATCCTGCTACTCCACCGCGCCACGCCTCTGCCCACGCCGCCGCGCCATGTCCAAATCCTTTGTGTTTCCTCTCTTCTGATTTGACTCTCCCTCGCCTTCTCTTTTGTTCTCCACGGACGAACTACCCTACGGAGCTCGAAGTGGTGAAGATCAACAGTCTTGGCAAGGACCCATCCCTTCCCCTTGACTTGCTTCTCAAAGCCGCCACATACGGCACAGTCCTCACTCCCCTCATCTTTGCAATCTCCAATAGTTGTCTTTATCCCTTCACCAGAAAAATGTGTGAAACTGTGGAAACTGAAGAAAGGCCCAAATTCAAAGATATTAAACGCTATTCCTGCGAGTACTGCGGTATCTGCAGGTCCAAAAAAGCCCTTATCATCTCTCACATCAATTTGCACCACAAGGACAAGGAGGAAAAAGCAAGAGCTGAAAGAGATCCCGAAGCAGAGGCTCCGAAATCCAACACGTGCGAGGAATGTGGGGCCACTTTCAAAAAACACGCCTATTTGTTGCAGCACATGCAAAGTCATTCCCTTGAGGTATTTTAA 612 0.4886 PRSIPLQSPFFYGHRTWFVHNPATPPRHASAHAAAPCPNPLCFLSSDLTLPRLLFCSPRTNYPTELEVVKINSLGKDPSLPLDLLLKAATYGTVLTPLIFAISNSCLYPFTRKMCETVETEERPKFKDIKRYSCEYCGICRSKKALIISHINLHHKDKEEKARAERDPEAEAPKSNTCEECGATFKKHAYLLQHMQSHSLEVF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1486 203 PANTHER - 122 201 - -
Aed5g1486 203 SUPERFAMILY beta-beta-alpha zinc fingers 130 198 IPR036236 -
Aed5g1486 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 176 203 IPR013087 -
Aed5g1486 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 132 159 IPR013087 -
Aed5g1486 203 SMART c2h2final6 176 198 IPR013087 -
Aed5g1486 203 SMART c2h2final6 132 154 IPR013087 -
Aed5g1486 203 ProSitePatterns Zinc finger C2H2 type domain signature. 178 198 IPR013087 -
Aed5g1486 203 Gene3D Classic Zinc Finger 109 202 - -
Aed5g1486 203 PANTHER ZINC FINGER PROTEIN 122 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1486 Aed-Chr5 19032791 19037523 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed5g1486 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1486 K09191 - gmx:100800196 165.236