Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1485 ATGCAGAAGCCAATGTCGATTTTTCTGAATGAAACCTCTTCCTTGTGGTTCTTCTTCCTATCTACGCTAGCATTGTTCACCACCATAATAGTCAATCTTTTATCGAATTTGAAATCCAATAAATCAGCAAAAAACTCACCACCTTCTCCACCAAAGCTTCCAATAATAGGAAATCTGCATCAGTTTGGCACCCTCACTCACCGCACTCTCCAATCCTTTTCCCAAACCTATGGCCCTTTGATGCTACTTCATTTTGGAAAGGTGCCAGTTCTTGTTGTCTCAAATGCTGAAGCAGCACGTGAGATTCTAAAAACACAAGACCATGTTTTCTCCAACAGACCACGTCGTAAGATGTACGAGATCTTCTTGTACGGTCTCAGAGGTGTAGCATCTGCTCCATATGGACCCTATTGGAGGCAGGTCAAGAGTATCTCTGTCTTGCATCTTCTGAGTCCCAAAAAGGTTCAATCTTTTCGCGAAATAAGGGAAGAGGAAGTTGTGGCAATGATTGAGAGAGTTAGGCTGAGTTGTGATTCTGATTCTGTAGCTTCCTTCATGCCGTTGAACTTAACCGATGTGTTAACTAAAGTCACAAATGATATAGTGTGTAGGTGTGTTATTAGAAGGAGATATGATGAGGGTGAGGTTAGGGAGCCAATAAGAGAGATGGAAGAGTTGTTGGGGGCTTCAGTTTTAGGAGACTATATACCTTGGCTTGGTTGGTTGGGAAGAGTTAATGGCGTGTATGCTAGAGCCGAGAGAGTGGCTAAAAAGCTTGATCAGTTTTATGATCAAGTTGTTCAGGAGCATCTTAGTACTAGTAATCAGAAGCATGAGAATGATTTTGTGGACATTTTGCTGTCCATTCAGGCCACAGATTTTCAGTCTGATAGAACATTCGTTAAGAGTTTGATCATGGATATGTTAGCCGCAGGAACTGATACTATCCTTGCAGTAATAGAGTGGGCTATGACAGAACTCTTGAGGCACCCAAAAGTGATGAAAAAACTACAAGATGAGGTGAGAAGCGTGGGCAGGGACATAATAACTGAAGAGGATTTGAATGACATGCCTTACTTGAAAGCAGTTATCAAAGAAACTCTGAGAATACATCCTGCAACACCCGTATTGATTCCAAGGGAATCATTGGAAGACACCAAAGTGATGGGATATGACATTGCAGCAGGCACACAAGTACTAGTTAATGCTTGGGCCATCTCAGTGGACCCTTCATATTGGGATGAACCTCTGGAGTTTGAACCAGAGAGACACTTTAAGAAGAGTTCAATAGATATCAAAGGACATGATTTTCAACTCATTCCATTTGGAGCTGGAAGGAGGGGATGTCCAGGTATAGCATTTGCCATGGTTGTCAATGAATTGGTTCTTGCTAACATTGTGCACCAATTTGATTGGGAAGTGCCTGCTGGAGTTGTTGGGGAAAATGCTTTGGATTTGTCTGAAACTACTGGATTGTCTGTTCACAAAAAGTTACCTCTTCTGGCATTTGCATCACTGCCTCATCATCATGTGTAA 1536 0.4206 MQKPMSIFLNETSSLWFFFLSTLALFTTIIVNLLSNLKSNKSAKNSPPSPPKLPIIGNLHQFGTLTHRTLQSFSQTYGPLMLLHFGKVPVLVVSNAEAAREILKTQDHVFSNRPRRKMYEIFLYGLRGVASAPYGPYWRQVKSISVLHLLSPKKVQSFREIREEEVVAMIERVRLSCDSDSVASFMPLNLTDVLTKVTNDIVCRCVIRRRYDEGEVREPIREMEELLGASVLGDYIPWLGWLGRVNGVYARAERVAKKLDQFYDQVVQEHLSTSNQKHENDFVDILLSIQATDFQSDRTFVKSLIMDMLAAGTDTILAVIEWAMTELLRHPKVMKKLQDEVRSVGRDIITEEDLNDMPYLKAVIKETLRIHPATPVLIPRESLEDTKVMGYDIAAGTQVLVNAWAISVDPSYWDEPLEFEPERHFKKSSIDIKGHDFQLIPFGAGRRGCPGIAFAMVVNELVLANIVHQFDWEVPAGVVGENALDLSETTGLSVHKKLPLLAFASLPHHHV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1485 511 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 SUPERFAMILY Cytochrome P450 47 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 PANTHER CYTOCHROME P450 71B11-RELATED 23 506 - -
Aed5g1485 511 Gene3D Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 Pfam Cytochrome P450 47 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1485 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Aed5g1485 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1485 Aed-Chr5 18976390 18978705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1485 44 505 Cytochrome P450 AT3G48270 48.827 5.19e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1485 - - gmx:100786425 803.897