Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1470 ATGTCAATTATAATTGCTTTAAAGGGAAGTAGTCAAATTCAAGGAATAATGCTTGATCCCCCTCAAAGAGAAGAAATTTATTGTATTGATACTATACTTGAGAAGATGAAGAATCTTAGAATTCTCATTGTCCGTAACACAAGTTTTTCACATGAGCCTCGTTATTTTCCAAATAACTTAAGGCTACTTGATTGGAAGAACTACCCTTCAAAGTCTTTCCTATTAGATTTTTATCCCAAAAAAATTGGGGCCTTCAATTTAAGTGGAAGTCCTCTGCTCAGATTTGACCATTTGACTTACATGAATATCTCTGGTTGTGATATGGTTACTGAATTTCCTAATGTGTCTTTAGTCATGAATTTAAGAGAATTGATACTTGATGGATGTGTGAATCTCATTAACATTCATGAATCAGTTGTATATCTCACTAACCTTGTTTCCCTAAGTGCTTCAGAATGCACGCAACTTGAAAGTTTTGTGGCAACAATGTTTGAAGGAAGCAATTCAACGAGTTTCAGATTAGAGACATTACATTTGGCCAATGCTGCGATATCAGACCAAGATCTTCACACCATTCTTTACTATTTTCCTAACTTGAAAGACTTAAATATATCATGGAACAAATTAGTGTCTTTGCTCCCAACACATATTTTAGAATCTACTGACTTAGTAAGTCTTGACATGAATTTTTGTTGTGAGCTTCAACAAATTCCAGAACTGCCATCAAGTGTTCAGAAAGTAGATGCCAGGCATTGCAAATCCTTAACTTTGGAGACAGCAAACATCTTATGGTCTCAAATTCCAGGATGGTTCAACTATGTTAACAAGGGATGGTTTCCAGATTTCAAGGCTCGTGGGAATTTCCCTCCAGTTGCTATAGCATTTGTGTTTGGGGAATTGAACGCCAATGTCTACTGTGAAACAGAGTTGACTTTATGTTCATGGGGAGTTTATGTGTACAATGAGACTAACATGGAAGATATCCACTTCACTAGTCATGATCCAAATTCCCCTTTGAAAAGAAGCCAAGGGTTGCACCTGCGATTCTCGAAGAAAGCATTAAGGATGGTTAAGGCTCCAAAAGATGGGAAAGGAACTTCATGTTCCTACATTGATGATGGGAAAAAGAGTCAAGAAGCCACAGCCGGTCCTATATGTTGGTGTGTTTTTTCACTGAAGAAGAAAAAAGATAAACAAAAATAA 1203 0.3658 MSIIIALKGSSQIQGIMLDPPQREEIYCIDTILEKMKNLRILIVRNTSFSHEPRYFPNNLRLLDWKNYPSKSFLLDFYPKKIGAFNLSGSPLLRFDHLTYMNISGCDMVTEFPNVSLVMNLRELILDGCVNLINIHESVVYLTNLVSLSASECTQLESFVATMFEGSNSTSFRLETLHLANAAISDQDLHTILYYFPNLKDLNISWNKLVSLLPTHILESTDLVSLDMNFCCELQQIPELPSSVQKVDARHCKSLTLETANILWSQIPGWFNYVNKGWFPDFKARGNFPPVAIAFVFGELNANVYCETELTLCSWGVYVYNETNMEDIHFTSHDPNSPLKRSQGLHLRFSKKALRMVKAPKDGKGTSCSYIDDGKKSQEATAGPICWCVFSLKKKKDKQK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1470 400 Gene3D Ribonuclease Inhibitor 22 281 IPR032675 -
Aed5g1470 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 178 IPR044974 GO:0006952
Aed5g1470 400 SUPERFAMILY L domain-like 17 257 - -
Aed5g1470 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 185 275 IPR044974 GO:0006952
Aed5g1470 400 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 178 - -
Aed5g1470 400 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 185 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1470 Aed-Chr5 18693408 18701940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1470 3 257 WRKY Transcription Factor Family AT4G12020 28.058 4.79e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1470 - - gsj:114401341 241.891