Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1451 ATGAACCAGAACGAGAAGCAGGAGTTGGAGCCTCCTTCGGAAGATGTTAACAACGATGGTGTTGAGTACTTGATCCTCAGCCAGGAACTCTTTTGCACTCAAGATTACTTGACACCCCCAAACCCCTTTCCTTTGAAAGGCTTTGATGGCAACATGGACGGGGAAGATGGCCCTTGCCCTAAGTCACCAGAGAAGCCAACTACTTCAAATGGCAAGAGATACCGAATGGATACTCTCGGTTCTAACTCGTCATGTGATGGTGAGCCATTCGTGGAACTTGGGAAGGATGAGGACATCAATGAAATCACTGATAACCCAAGGCCTGGAAGTTTTGTGTCTCTTTCTGCAATTTCATTCCGTTGCAAGCTTATGCCACCTCCTTGCATTAGAAACCCCTTCTTGGAAAGCCTTTTCAAAGAGGAAATAGACAAATTTGAAACACAGATCAAAATTTACAGAGGTAACTTTAGCAATGTTTTCAAAGTATTGAAACGAGTAGATGGCTGCTTGTATGCTGTGAAACGCAGCATTAGGAAGCTGTGGGAGGAAACAGACAGTCTCATTTACCTTCTTGTTTCTTTAGATTTTCATGAGAACATTGTGAGGTACTATTCTTCATGGTTGGATGATGAACAGCTGAACATTCAGATGGAGCTATGTGATCACAGCTTATCTATAAAAGATTGCTCATCATTACTTACTGCACAACATGAAATAGAAGCTTTATATCAGATTGCCAGTGCATTGAAATTTATCCATAAGAAGGGAATAGCTCATCTTGATGTTAAGCCCGAAAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTACTTGATAACAGCCTGCTAGTTGTCTTGGGTGATGCACATTATATGCCTCAGGAAGTCCTTAATGAGAATTATGATCACCTTGATAAGGTCATGATGGACCCTGATCCAGTTAAGAGGCCTTCTGCTGCGGAGTTGGTGGAGAGGGTCCTTGAAATATGA 1011 0.4164 MNQNEKQELEPPSEDVNNDGVEYLILSQELFCTQDYLTPPNPFPLKGFDGNMDGEDGPCPKSPEKPTTSNGKRYRMDTLGSNSSCDGEPFVELGKDEDINEITDNPRPGSFVSLSAISFRCKLMPPPCIRNPFLESLFKEEIDKFETQIKIYRGNFSNVFKVLKRVDGCLYAVKRSIRKLWEETDSLIYLLVSLDFHENIVRYYSSWLDDEQLNIQMELCDHSLSIKDCSSLLTAQHEIEALYQIASALKFIHKKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNSLLVVLGDAHYMPQEVLNENYDHLDKVMMDPDPVKRPSAAELVERVLEI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1451 336 SUPERFAMILY Protein kinase-like (PK-like) 132 331 IPR011009 -
Aed5g1451 336 Pfam Protein kinase domain 148 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1451 336 MobiDBLite consensus disorder prediction 63 79 - -
Aed5g1451 336 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 146 298 - -
Aed5g1451 336 SMART serkin_6 145 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1451 336 Coils Coil 327 336 - -
Aed5g1451 336 ProSiteProfiles Protein kinase domain profile. 145 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1451 336 PANTHER BNAA08G27310D PROTEIN 146 298 - -
Aed5g1451 336 Gene3D Transferase(Phosphotransferase) domain 1 219 314 - -
Aed5g1451 336 Gene3D Phosphorylase Kinase; domain 1 135 218 - -
Aed5g1451 336 MobiDBLite consensus disorder prediction 42 79 - -
Aed5g1451 336 MobiDBLite consensus disorder prediction 1 20 - -
Aed5g1451 336 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 16 136 - -
Aed5g1451 336 PANTHER BNAA08G27310D PROTEIN 16 136 - -
Aed5g1451 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1451 Aed-Chr5 17970374 17972571 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1451 18 314 Core Cell Cycle Gene Families AT1G02970 46.356 2.39e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Aed5g1451 Pkinase 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1451 K06632 - gmx:100784055 415.616