Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1447 ATGAAGCATAACGAGAAGCTGAAGGTGGAGTTAGAGCCTCCCACTAACGACGGTCTTGCGTTTTCGACCTTCATTCAGGAATTCACTCAAGATGGCAACATAGACCCTAAGTCACCGGAGAAACCAACTACTTCAAATGGCAAGAGATGCCGAATGGATGCTCTCTTGGGAGATACTCTTGGTTCTACCGCGTCTTGTGATTATAAGCCATTCGTTGAACTTGGGAATGACCAGGAAATCAGTGAAATCACTGATAAGCCTAACCCTAAAACTCTCTTCCCTGCACTTACTACTGACTTTCAGCAGATTGAGGAAATTGGTAGTGGTAACTCTAGCAATGTTTTCAAAGTATTGAATCGAGTAGATGGCTGCTTGTATGCTGTTAAACACAGCATTAGGAAGCTGTGTGGCAAAACAGACAGGACAAAAGCCTTGATTGAAGTTCAAGCTTTGGCTGCCTTAGGTTCCCATGAGAATATTGTGAGGTATTATTCTTCATGGTTTGAAAATGAACACCTGTATGTTCAGATGGAGCTATGTGATCACAGCTTATTCATTAATGATTGCCCATCAATACTTCCTACACAGCATGAAGTAGAAGCTTTATATCAGGTTGCAAGTGCATTGAATTTTATCCATGAGAAGGGAATAGCTCATCTTGATGTCAAACTTGAAAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGTGATTTCGGATGTGCAGCTCCATGTGATAATAACCTTGACAAGGTTGATATCTTCTCCTTGGGAGTTTCTATGTTTGAGTTAATTACTAGGCTGCGTTTGCTAGAATCAGAAATTCTGTTCTCGAATCTTAATGTAAAGGTGCCACTTGTGCCAGGAGTTTCGGTGCAATTTCAAAATTTGCTTGAGGTATTGGAAAACTGA 912 0.4035 MKHNEKLKVELEPPTNDGLAFSTFIQEFTQDGNIDPKSPEKPTTSNGKRCRMDALLGDTLGSTASCDYKPFVELGNDQEISEITDKPNPKTLFPALTTDFQQIEEIGSGNSSNVFKVLNRVDGCLYAVKHSIRKLCGKTDRTKALIEVQALAALGSHENIVRYYSSWFENEHLYVQMELCDHSLFINDCPSILPTQHEVEALYQVASALNFIHEKGIAHLDVKLENIYVKNGVYKLGDFGCAAPCDNNLDKVDIFSLGVSMFELITRLRLLESEILFSNLNVKVPLVPGVSVQFQNLLEVLEN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1447 303 Gene3D Phosphorylase Kinase; domain 1 72 177 - -
Aed5g1447 303 Pfam Protein kinase domain 100 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1447 303 SUPERFAMILY Protein kinase-like (PK-like) 93 299 IPR011009 -
Aed5g1447 303 ProSitePatterns Protein kinases ATP-binding region signature. 106 134 IPR017441 GO:0005524
Aed5g1447 303 PANTHER BNAA08G27310D PROTEIN 97 300 - -
Aed5g1447 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Aed5g1447 303 ProSiteProfiles Protein kinase domain profile. 100 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1447 303 Gene3D Transferase(Phosphotransferase) domain 1 183 301 - -
Aed5g1447 303 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 97 300 - -
Aed5g1447 303 SMART serkin_6 100 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1447 Aed-Chr5 17839042 17840613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1447 98 301 Core Cell Cycle Gene Families AT1G02970 53.586 4.07e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Aed5g1447 Pkinase 7.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1447 K06632 - gmx:100784055 328.176