Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1437 ATGAAAAGAGTAAAACATCGTCTTAAATTGTTGACACAAATGCCTCTAGCTCAGACACAGAAAATCTGCAGATGTTTCTGTCAGGGCACTCAACTATCTCCAAACCACAATGATTCTTCATCATCATCGGGTGATTTTCCTGTGGTTTCACCAAGAATCGAGCTCACAGATGGGAGGCACCTTGCCTATATTGAGAGAGGCATCCCCAAAGACATGGCAAAATACAAAGATGAATTTTCTGGCACCCCAAGGTTGGCACTGATAGCCCCAGTGATAAGGGAAGACTACAGAAGGAAAGTTGTGCAGTGGTCTATGTGGCTTGCAAATCACTGGCCTAAACTACTGCATTGGTGGCTCCCTTCAACTGCTGTCATTGAAAATAACCCTGCAATTTTCAACAAAACTGATGTTGATATTCTTAAGACAATCCCTGGCTTCACTATGCTTACAAAGAATTCAGATATTCTCCCTTCTCTTTCTGTTCAGGTTGCTGTGTTTTTTGAGACAAAAGCTGTTGTTTATGGCAGGTTGTTCCAAAAAGTTGCACCTTTATCAGCACACATGGATCTCCAACAACCAAATCAAGAGGTGCCATTGCAAGAAGCAGATGGCACATTTTCTCAAAACTCAATACTCTCACTCACCATTGATGAGTTACATTGCAAGAATGGAAAGAGCTTAGGGTCCATGAAAATGGATGAATTCTTTGCCAGCATTTGGAACTCAGATGACAACCAACCTAACCTTGATGATGAAGCTGCAAAGGGTAAAGGTGTAGCAACAGAAACCACAATTTTCCAACCACAGCCACAGCACAATGCACCAGCACCACTACTCAAAAGGCAACCCACACTTGGAGAAATGTCTTTGGAGGAATTCCTAGTAAAAGCTGGGGTGGTGAAAGAATCATCATTACTATTCAACTCTTCATTACCTCTGAATCAGATTGGGCTTGAACCACACAAAATGTTGCCACAGAATAGCAACTTAGGAGAATCAAGTGGGAAGGATAATAAGAAGAGGATAATTGATGGTCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGTTGAAGAATCGCGAATCCGCAGCACGTTCTCGAGCTAGAAAACAGGTTTTGTCTGTTAATCACAGTTCATTTGTATGGGCTAGGGGAAAAGAAAAGTGCACCAGAGTTTGTTATTTTCTCTAA 1197 0.4211 MKRVKHRLKLLTQMPLAQTQKICRCFCQGTQLSPNHNDSSSSSGDFPVVSPRIELTDGRHLAYIERGIPKDMAKYKDEFSGTPRLALIAPVIREDYRRKVVQWSMWLANHWPKLLHWWLPSTAVIENNPAIFNKTDVDILKTIPGFTMLTKNSDILPSLSVQVAVFFETKAVVYGRLFQKVAPLSAHMDLQQPNQEVPLQEADGTFSQNSILSLTIDELHCKNGKSLGSMKMDEFFASIWNSDDNQPNLDDEAAKGKGVATETTIFQPQPQHNAPAPLLKRQPTLGEMSLEEFLVKAGVVKESSLLFNSSLPLNQIGLEPHKMLPQNSNLGESSGKDNKKRIIDGPPEVVVERRQRRMLKNRESAARSRARKQVLSVNHSSFVWARGKEKCTRVCYFL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1437 398 PANTHER BZIP TRANSCRIPTION FACTOR 328 378 - -
Aed5g1437 398 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 189 277 IPR043452 GO:0003700|GO:0045893
Aed5g1437 398 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 277 312 IPR043452 GO:0003700|GO:0045893
Aed5g1437 398 Gene3D - 351 376 - -
Aed5g1437 398 MobiDBLite consensus disorder prediction 325 344 - -
Aed5g1437 398 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 356 371 IPR004827 GO:0003700|GO:0006355
Aed5g1437 398 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 328 378 IPR043452 GO:0003700|GO:0045893
Aed5g1437 398 PANTHER BZIP TRANSCRIPTION FACTOR 277 312 - -
Aed5g1437 398 PANTHER BZIP TRANSCRIPTION FACTOR 189 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1437 Aed-Chr5 17285952 17290658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1437 192 363 bZIP Transcription Factor Family AT3G44460 34.440 1.49e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1437 K14432 - gmx:100799576 214.157