Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1434 ATGGGATCTTCCAATGAAGGATCCTCTTCAGTATGGTCCAATACACACGCAAAGGGAACTGATAAAATTCAAGCCATGGTTCTGAATTTAGTTCAACCATGTGATTATGAAGCGCACTGGAGCACTGGAGCCTTCTCCAAGATAAGTGAGTTAAGGTTACTAAAGTTATGTGATATGCAGCTTCCCCTTGGACTCAACTGCCTTTCTAGTGCACTAAAAGTTCTGCATTGGAGAGGATGTCCTTTGAAATCCCTGCCACTTACTACTAATCAACTAGATGAAATTGTTGACCTCAAATTGTCTCACAGCAAAATTGAACAACTTTGGCATGGAACAAAGTGGGTATTTGGGAATCAACAAACTCCTACTCCTACTGCATTTAGATTACCATCTTCTAAACTGAATCTACTACCCTCTTTGAAGAGAATAAATTTAAGTTACTGCAATCTATCTAAAGAGTCAATCCCAGATGATCTTTGTCACTTATCTTCATTGCTGATTCTAGATCTCACTGGCAACAATTTTTTCCATCATGATTTGTCCCTCAAAAATGTGTTTCATTTGCAAAAATACCAGTTCCTCATAATTGCCCTGCAGATGAATGTGTGGGATTTGCTGTGTTTCCTATTAGTAAGTTATGCTGTTCCACCTGAGGCGTGCCATCACGAAGTTGATTGCTACTTGTTTGGACCTAATAGCAAGAGGATTATCAGCTCCAGAAACTTACCTCCCATGGATCCGTCTTGCCCTCACCTTTATATTCTCTATTTGTCCATTGACAAATACCATGACATGATGACATGA 804 0.3955 MGSSNEGSSSVWSNTHAKGTDKIQAMVLNLVQPCDYEAHWSTGAFSKISELRLLKLCDMQLPLGLNCLSSALKVLHWRGCPLKSLPLTTNQLDEIVDLKLSHSKIEQLWHGTKWVFGNQQTPTPTAFRLPSSKLNLLPSLKRINLSYCNLSKESIPDDLCHLSSLLILDLTGNNFFHHDLSLKNVFHLQKYQFLIIALQMNVWDLLCFLLVSYAVPPEACHHEVDCYLFGPNSKRIISSRNLPPMDPSCPHLYILYLSIDKYHDMMT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1434 267 Pfam Leucine Rich Repeat 96 113 IPR011713 -
Aed5g1434 267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 142 185 IPR044974 GO:0006952
Aed5g1434 267 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 142 185 - -
Aed5g1434 267 SUPERFAMILY RNI-like 22 258 - -
Aed5g1434 267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 112 IPR044974 GO:0006952
Aed5g1434 267 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 19 112 - -
Aed5g1434 267 Gene3D Ribonuclease Inhibitor 30 204 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1434 Aed-Chr5 17257790 17267592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1434 19 174 WRKY Transcription Factor Family AT4G12020 32.121 1.27e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1434 - - gmx:100815486 163.696