Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1410 ATGGCTTACGTTTGTACCCATTTAACATTGGGTATGTGTTCTTGCACCCCGACCTTCACTCATGCATTTGGTTCTTCTTCTTCCACCAAGAAGAGGAAACTCTCCAACGAAGTGCATGCAGCTTCAAGAAAGAAGAAGAAGGAGCTGAAGAATGATGATGATGAGGTTTGGAAGATAAAGAAAGTGTTGAAAGAGAGTGATGTTGGGAACATGAGCAGGTTCATGCTGGGAAGAGACATGGCTGAGGAGTTTGTGCTTCCTGTGTTGGGGGCTGATGCTGCTGAGATTGATAAAGGAATTGTTGTTAACGTTTGTGATGTTGACACAAAGTCCATGCACTCTCTTGTTTTCAAGAGATGGGTTTCTTCTAAAAGTTATGTTTTCATTGGCAACTGGGGTAAAGATTTTGTTGCAAGAAGAGGGTGGTATGTGTCAAAATCTCTGTTTGTGGGTTCTAAGTTGCAGGAACAAACTATACTACATGCAATCAAGCAAGTCAAGCAAGAGCTTAGAGAGCTTGGTAAATTTATCAGAAGTAAAGATACTAGTTATATCAAAGTCATTATTATTTTGGACACTACGTGA 585 0.4034 MAYVCTHLTLGMCSCTPTFTHAFGSSSSTKKRKLSNEVHAASRKKKKELKNDDDEVWKIKKVLKESDVGNMSRFMLGRDMAEEFVLPVLGADAAEIDKGIVVNVCDVDTKSMHSLVFKRWVSSKSYVFIGNWGKDFVARRGWYVSKSLFVGSKLQEQTILHAIKQVKQELRELGKFIRSKDTSYIKVIIILDTT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1410 194 SUPERFAMILY DNA-binding pseudobarrel domain 54 141 IPR015300 -
Aed5g1410 194 Coils Coil 31 51 - -
Aed5g1410 194 Gene3D - 46 171 IPR015300 -
Aed5g1410 194 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 27 141 - -
Aed5g1410 194 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 27 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1410 Aed-Chr5 16434975 16436969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1410 40 141 B3 DNA Binding Superfamily AT3G24650 30.000 7.54e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1410 - - gmx:102663812 202.986