Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1393 ATGGAACCATTCGGATTGGTATTCCTCCTTCTCCTTCCGCCGTTGCTGTTCTCCGGCGCAGAATCGGCGTGCAAGCAGGGTTGTCCAGTGGCACTAGCCTCCTACTACCTATGGGCGGGCTCCAACCTCACCTACATAACCGAGATCATGGGCTCTACCACCCTACTCACAAGCCCCGACGACATAGTCAACTACAACAAGGACACCGTGGCCAACAAGGACATCATCATCGCCGACGAAAGGGTCAACGTCCCCTTCCCCTGCGACTGCATCGAGGACCAGTTTCTTGGTCACACGTTTAAGTACGAGGTTCAGTCTCAGGACACCTACGAGTTTGTAGCCAAGACCGTGTTTTCTAACCTCACCGATGTTGCCTGGTTGAGGAGGTTCAATTCCTATCTGCCCGACAACATTCCCGACACGGGAACGCTCAATGTCACGGTTAATTGCTCTTGTGGGAATACTGATGTTGCCAATTATGGCTTGTTCGTCACGTTCCCTCTTCGGACCGGGGATACTCTCGGGACTGTGGCTAATCATGTCGGGCTTGACTCAGCCTTGCTTCAGAGCTACAATCCTGGTGTCAATTTCAATCAGGGGACTGGACTCGTTTATGTTCCCGGAAAAGATCAAAATGGTAGCTTTGTGTTTTTGTTGTCCAGTTCAGGAGGTCTTGCTGGTGGGGCTATTGCAGGAATAGCTATTGGAGTTGTGGCAGGTCTTCTGTTATTGGGAGTTTGTATATATGTTGGATATTTCCGGAAGAAGAAGATACAGAGGAAGGAACTTCTTCCGCAAGATTCCAGTGCACTTTTTGCTCAAGATGGGAAGGAAGAAACTTCTCGTAGTAGTGCAAATCAAACTTCTGGACCTGGTGGTCCTGCCGTCATCACAGGCATAACAGTGGACAAATCAGTGGAGTTTTCATATGAGGAACTGGCAAACACCACGGATAACTTTAGTCTGGCTAATAAAATTGGTCAAGGTGGTTTTGGGTCTGTCTATTATGCGGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAAAGAATTTCTTGCTGAATTGAAAGTTTTGACACGTGTTCATCATCTTAACCTGGTGCGGTTGATTGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGTCAACATCTGCGTGGTAGTAGAGAACCACTGCCATGGGCTACTCGGGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCACGAGCATACAGTGCCAGTATACATTCATCGTGACATAAAGTCAGCAAATATATTGATAGACAAAAACTTCCGGGGCAAGGTTGCTGATTTTGGTTTGACCAAACTGACAGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCGGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAGGAAGCAATTGTCAAGATGGACGATTCTATTGCCGACTCAAAGGGCCTCGTAGCTTTGTTTGATGGAGTTCTTAGTCAGCCAGATCCTACGGAAGAGCTCTGCAAACTAGTTGATCCAAGGCTTGGGGATAACTACTCAATTGATTCTGTTCGAAAGATGGCACAACTAGGCAAAGCATGCACACAAGACAACCCCCAACTTCGTCCAAGTATGAGATCTATTGTGGTTGCTCTTATGACACTTTCTTCAACTACCGACGATTGGGATGTTGGCTCCTTCTATGAAAATCAAAATCTTGTGAATCTTATGTCGGGAAGATAG 1857 0.4615 MEPFGLVFLLLLPPLLFSGAESACKQGCPVALASYYLWAGSNLTYITEIMGSTTLLTSPDDIVNYNKDTVANKDIIIADERVNVPFPCDCIEDQFLGHTFKYEVQSQDTYEFVAKTVFSNLTDVAWLRRFNSYLPDNIPDTGTLNVTVNCSCGNTDVANYGLFVTFPLRTGDTLGTVANHVGLDSALLQSYNPGVNFNQGTGLVYVPGKDQNGSFVFLLSSSGGLAGGAIAGIAIGVVAGLLLLGVCIYVGYFRKKKIQRKELLPQDSSALFAQDGKEETSRSSANQTSGPGGPAVITGITVDKSVEFSYEELANTTDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKMDDSIADSKGLVALFDGVLSQPDPTEELCKLVDPRLGDNYSIDSVRKMAQLGKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1393 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Aed5g1393 618 CDD STKc_IRAK 326 587 - -
Aed5g1393 618 SMART serkin_6 320 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1393 618 Pfam Protein tyrosine and serine/threonine kinase 322 589 IPR001245 GO:0004672|GO:0006468
Aed5g1393 618 ProSiteProfiles Protein kinase domain profile. 320 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1393 618 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Aed5g1393 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 6 618 - -
Aed5g1393 618 Gene3D Phosphorylase Kinase; domain 1 305 390 - -
Aed5g1393 618 SUPERFAMILY Protein kinase-like (PK-like) 301 590 IPR011009 -
Aed5g1393 618 Gene3D Transferase(Phosphotransferase) domain 1 391 609 - -
Aed5g1393 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 618 IPR044812 GO:0019199|GO:0045087
Aed5g1393 618 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1393 Aed-Chr5 15519598 15536708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1393 11 618 Receptor kinase-like Gene Family AT3G21630 58.494 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed5g1393 PK_Tyr_Ser-Thr 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1393 - K13429 gmx:100777781 1046.57