Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1387 ATGAAGAGTTTGAAGTTGATGGTGTGGGGGAAGATTATGAAGATGATAGTGTGGGAAGGGGATAAAGAGGATCTACAGAAAGATTATGAAAAAGATTTTGTAGAAGAGTTTCACGATAATGATTTGGTGAAAGAATCCGGAGAAAATTTACATGAGCACTACAAAGAGGAGTATGAAGATGAGTTTATGGAGGAGTTTGAAGATGATGATGTGGAGGACGATTGTAGAGAGGATTTGGAGGAAGAGTATGAGGAAGTTGTGGATCATGAATTCTCGGAGCCAATTGTGATCGAGGATTTGAATGACGTTTATAGTTTGCATTTGAATAATGTTGGTGTGGAAGAGATAAGCAGATGTTTGTTTTCAAATTTGGATGTTGCTTATGCGTTTTACAGTTGTTATGCAAGGTTTAATGGATTTTGTCCATGCAAGAACAATATATTGAGAAACTCCAAAGGACAAGTATTGCAACAAACATTTGTATGTAATAAGCAAGGTTATCATGAAGATAGGGGAATAGTATTGGGTAAGAGGAAGCAACGCCAGAGGGTTGAAACCAAATGTGGTTGCGAGACTGTGGACATCTTTCATTTAATGGGAAGTCAGTGTGGTGGTTATGCTAAAGTTGGGTATTGGAAGAAAGACATTGTTAATTGTCAAAAACAAGGAACAAGAGGCAAGGATAACACATTTAGAGAAACAAATAAGAACAATAGAAGAATTGTTACATCAATCAAGACTTTTGGATCGATTGCGGCTCCTTCTACTCCAAAGAATGAAAGCGTCTTATTGTCCGTAAGTGATGCTAAATTTAAGGAGATGAAAGTTGACAATGAACCAGAAGAACAACTCAACTGCACCTTGACAACGAATTTGAAACAATATTGCGTTGTGAACACTAAAAAATCTACACTCGACTAA 921 0.3692 MKSLKLMVWGKIMKMIVWEGDKEDLQKDYEKDFVEEFHDNDLVKESGENLHEHYKEEYEDEFMEEFEDDDVEDDCREDLEEEYEEVVDHEFSEPIVIEDLNDVYSLHLNNVGVEEISRCLFSNLDVAYAFYSCYARFNGFCPCKNNILRNSKGQVLQQTFVCNKQGYHEDRGIVLGKRKQRQRVETKCGCETVDIFHLMGSQCGGYAKVGYWKKDIVNCQKQGTRGKDNTFRETNKNNRRIVTSIKTFGSIAAPSTPKNESVLLSVSDAKFKEMKVDNEPEEQLNCTLTTNLKQYCVVNTKKSTLD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1387 306 Pfam FAR1 DNA-binding domain 130 192 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1387 Aed-Chr5 14971368 15003955 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed5g1387 FAR1 1.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1387 - K17604 mtr:MTR_1g070355 99.7525