Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1382 ATGGATCGATTGAGTCAGCAAAGACCTGTGTATTTTCACTCCGAAAGTATCCATTTCAGAGGCACCAACATCTCTCAGCCTAATATGTGCACAGTGCTTACAGCTGTAGGAAATGGAACTAATCTAGATTCTCATTATGTACTAGATGTTGATGACAATGCTACAGTGTTTGGGATGACACAATACAATGGAATTCAGCAAGCTCCCAGTGCTAATGGAAGTTCATCAGAAAATGCAAGAATGGGTCCACAGAGATATCACCATACAGCCGGCAGCAGCAGAAGTGGCCACAGATTTCTCAGTCCTCCTCCACAGCAGTACCATAGCTTTCATAATCAAACACATTATGTGCAAGAGATCAGAGATGACTCTATCATCTTTCATCCTCCAGTATCTGCTCCTTCGTATAGAGTTCCGACAAATCCTTTACACAGTTCTTCAATCCTCATACAAGATGCTATTGACATGGGTGCTAGGCATGTTGGCCCTGCACCATATGAGCTTCTTGCATTAGGTGAGCAGATTGGCAATGTAAATTTGGGTTTGTCAGAAAACATAATTACAAGTCAAATGAAGACAAAAACTTGTTTACTGCCTACTAATGATACTAACTTGGAGGAGGCAGCTTCTGGGGAACAGGAACCTGATTGCGTAATATGTCAGGATGAATATCAAAACCAAGACAAGATTGGAATTCTCTAG 702 0.416 MDRLSQQRPVYFHSESIHFRGTNISQPNMCTVLTAVGNGTNLDSHYVLDVDDNATVFGMTQYNGIQQAPSANGSSSENARMGPQRYHHTAGSSRSGHRFLSPPPQQYHSFHNQTHYVQEIRDDSIIFHPPVSAPSYRVPTNPLHSSSILIQDAIDMGARHVGPAPYELLALGEQIGNVNLGLSENIITSQMKTKTCLLPTNDTNLEEAASGEQEPDCVICQDEYQNQDKIGIL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1382 233 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 65 160 IPR045191 GO:0061630
Aed5g1382 233 MobiDBLite consensus disorder prediction 67 104 - -
Aed5g1382 233 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 167 233 IPR045191 GO:0061630
Aed5g1382 233 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 65 160 - -
Aed5g1382 233 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 167 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1382 Aed-Chr5 14776153 14777503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1382 148 233 C3H Transcription Factor Family AT2G15530 37.755 4.41e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1382 K19041 - gmx:100808611 213.001