Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1381 ATGCACCCTTCGGTACTTTCACAGCACCCCCTGAAATTTACAAACCACACTTTCCCGCCTATTTCTTCCTCCTCTTCCTCTTCTCCTTCTTCTTCTGCTTTCTCTCTCTCTGCATCTTTTCCCAATACCCTATGCCTCTGTCGGCGAGTTTCTACTGAGAATTTGGGGAACCTATCCCTCTCCGCCGCTCTCACACTCTCTCACTGCTCCTCCGGTGCCCCTGACGCTCCCGTCAAAACCCTACCCAATGGCTTCGGTTCCGAGCCTGCCTTCGAGCCTCGGGTTTTGAAGCGAAGCCGTGGCTCCCTGGATCGGGTGAAGAAGCCCGTCGACAAGCCTTTCCAGGATCGCCTCAAAGATTCCTTCTCTTTCCCTTTTCTTGCTGCCGCTCCCAAGATGGTTGAATGTTGTTTTTGCCACCATTTTATCTGCCCTTTGGAGGAGCTCTTGTGTTCTGTTCGCGGATGCGACGCTCGCTACCATTCCGAATGTGCTAAAGAAGCTTTTGGGGCTTCCAGTCTGAAAAAATTCAAGTGTCCACAACATGTATGCTTCATTTGCAAGAAAAATAATCAGTTGAAGTGTGTTCGGTGTAAAATAGCATTCCATAAAAAATGTGCACCATGGCCAGATGAAGTGCTAGAGCTAAAAGATCATCCTGGGCAAGCTGTCTGCTGGAGGCATCCTTCTGATTGGCGCCTGAATAGAATGCCTGATGCTTCAACAAGTGACATTTCGGAAGTATTTTGTCGCTTGCCTCTTCCATTTATCAGTGAGGAGTTTAAGATTGACACCACTTGGAAAGACATGGACAGTAAGATGGAGCAGCCACCTTTGTATGTACACATAAGACGCAATATATACTTAGTAAAGAAGAAACGCAGTGGTGTGGATGATGGAGCAGGGTGCACCAGTTGCAATTCTACTTCTACATGTTCTGATGATTGTGTGTGCAGGGTACAATGCATAAGCTGCTCAAAGGCATGTCGCTGCTCAGAAAATTGCAGTAATCGACCATTTCGCAAGGAGAAAAAGATCAAGCTTGTCAAGACTGAACTTTGTGGATGGGGAGTGGTGGCTGCTGAAACAATCGATAAAGGTGGATTTATTATTGAGTATATTGGAGAAGTCATTGATGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAATACAGGGGTGTACAGAATTTTTACATGTGTGAGATTCGTAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGTGATCCCAACTGTGTGTTGGAGAAGTGGCAAGTTGATGGTGAAACACGTGTGGGTGTATTTGCTGCTCGTTCAATAGAAGCTGGAGAGCCATTAACATATGATTACAGATTTGTGCAATTTGGTCCAGAGGTCAAATGCCACTGTGGTGCAGCAAATTGTCAAGGCTTTCTAGGAACGAAAAAGAAAATTGGGAAGCTAGACCTCTGTTGGGGTTCAAAACGTAAGCGAACATCAAATTCTTCTTGTATCACGTTAGTAACAGCAGCTGTGATTTGCCAAAATATTAAGTGA 1566 0.4496 MHPSVLSQHPLKFTNHTFPPISSSSSSSPSSSAFSLSASFPNTLCLCRRVSTENLGNLSLSAALTLSHCSSGAPDAPVKTLPNGFGSEPAFEPRVLKRSRGSLDRVKKPVDKPFQDRLKDSFSFPFLAAAPKMVECCFCHHFICPLEELLCSVRGCDARYHSECAKEAFGASSLKKFKCPQHVCFICKKNNQLKCVRCKIAFHKKCAPWPDEVLELKDHPGQAVCWRHPSDWRLNRMPDASTSDISEVFCRLPLPFISEEFKIDTTWKDMDSKMEQPPLYVHIRRNIYLVKKKRSGVDDGAGCTSCNSTSTCSDDCVCRVQCISCSKACRCSENCSNRPFRKEKKIKLVKTELCGWGVVAAETIDKGGFIIEYIGEVIDDALCEKRLWDMKYRGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEAGEPLTYDYRFVQFGPEVKCHCGAANCQGFLGTKKKIGKLDLCWGSKRKRTSNSSCITLVTAAVICQNIK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1381 521 SMART PostSET_3 467 483 IPR003616 -
Aed5g1381 521 ProSiteProfiles Post-SET domain profile. 467 483 IPR003616 -
Aed5g1381 521 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 119 510 - -
Aed5g1381 521 ProSiteProfiles AWS domain profile. 298 344 IPR006560 GO:0005634|GO:0018024
Aed5g1381 521 SMART set_7 344 467 IPR001214 GO:0005515
Aed5g1381 521 Gene3D SET domain 253 499 IPR046341 -
Aed5g1381 521 SMART PHD_3 184 229 IPR001965 -
Aed5g1381 521 SMART PHD_3 135 183 IPR001965 -
Aed5g1381 521 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 52 514 IPR025787 -
Aed5g1381 521 Pfam SET domain 355 460 IPR001214 GO:0005515
Aed5g1381 521 PANTHER SET DOMAIN PROTEINS 119 510 - -
Aed5g1381 521 CDD SET_ASHR3-like 345 483 - -
Aed5g1381 521 ProSiteProfiles SET domain profile. 344 461 IPR001214 GO:0005515
Aed5g1381 521 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 231 IPR013083 -
Aed5g1381 521 SUPERFAMILY SET domain 263 473 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1381 Aed-Chr5 14688915 14700737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1381 325 482 C2H2 Transcription Factor Family AT2G23740 37.989 1.93e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed5g1381 SET 7.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1381 - - gmx:100791481 834.328