Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1364 ATGGAAATCGACACACAAGAAGAGTGCAATAATTGGAATGAGGATACAGAGATGAATGAAGTTGATAGTGATGAGTATAATAATGATCTTAGGAGTGATGAAGGAAGGAATGATGATATACTTAGACTCAAATTTGATACCAAGTTGGAAGCTTACGAGTTTTATAAAGATTATGCCAAATGTCAAGGCTTTGTTGTTAGGAAAGATGATCTCAAACATGATAAAAAGAATGCTAACATTGTGATGCATCAATTTTTTTGTAGTAGAGAGGGGCTTAAAAGCGAAAAACATTTGGATAGAGTAGACTAA 309 0.3333 MEIDTQEECNNWNEDTEMNEVDSDEYNNDLRSDEGRNDDILRLKFDTKLEAYEFYKDYAKCQGFVVRKDDLKHDKKNANIVMHQFFCSREGLKSEKHLDRVD 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1364 102 Pfam FAR1 DNA-binding domain 53 97 IPR004330 -
Aed5g1364 102 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 6 99 - -
Aed5g1364 102 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1364 Aed-Chr5 13982956 13983309 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed5g1364 FAR1 3.6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1364 - K17604 ccaj:109792835 79.7221