Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1359 ATGGAGGGTCAATCTAGGGAAGAGTATATTGGATCATTAAGGAGGAAAAGCAGCGGGTTTTCTCGTGGAGTTTCTAAATACAGAGGTGTTGCAAGACACCATCATAACGGAAGATGGGAGGCTCGGATTGGCAGGGTTTTCGGCAACAAATATCTTTACCTCGGAACTTATGCAACCCAAGAAGAAGCTGCCACAGCATATGACATGGCAGCAATTGAATATCGAGGACTCAACGCTGTGACCAATTTCGACCTCAGCCGTTACATCAAATGGCTGAAACCCAATAACAATAACAATAACTTAGTCAACTCAAATGATCTTGTTGACTCTAACCCTAATTCTGAGAGCAACATTGCTACCCTAAACTCTAATCATCAACAAAAAGGATTCGATTTTTTCCACAATTCTTCTTCTCATAGATATGGAGAAGAAGGGGATCATGATATCATGTTCAGCGAGCTCAACGGCTTTGTGCCCCCTATGTTCCATTATAATGACTTTGAGGCTTGA 510 0.4196 MEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNNNNLVNSNDLVDSNPNSESNIATLNSNHQQKGFDFFHNSSSHRYGEEGDHDIMFSELNGFVPPMFHYNDFEA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1359 169 Pfam AP2 domain 25 76 IPR001471 GO:0003700|GO:0006355
Aed5g1359 169 CDD AP2 25 86 IPR001471 GO:0003700|GO:0006355
Aed5g1359 169 ProSiteProfiles AP2/ERF domain profile. 26 84 IPR001471 GO:0003700|GO:0006355
Aed5g1359 169 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 128 - -
Aed5g1359 169 SMART rav1_2 26 90 IPR001471 GO:0003700|GO:0006355
Aed5g1359 169 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Aed5g1359 169 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Aed5g1359 169 Gene3D AP2/ERF domain 25 86 IPR036955 GO:0003700|GO:0006355
Aed5g1359 169 SUPERFAMILY DNA-binding domain 25 86 IPR016177 GO:0003677
Aed5g1359 169 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1359 Aed-Chr5 13756919 13759011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1359 1 168 AP2-EREBP Transcription Factor Family AT1G79700 53.158 8.96e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed5g1359 AP2 2.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1359 K09285 - gmx:100795869 216.468