Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1358 ATGTCAATGGACAACAGTGGTGAGGGGCTTAGTTGGTTAAATGAATCAGTTGCTTTTATGTGTACAAAACAAAAGTTTATAAGTCTAGAGATGGCCTACCAATTCTATCATTGGTTTGGAAGAGTGAATGGGTTTAGTGTTAGAAGAAGCTTTGTTTTGCAGAGTAGTAAGGGAGAGAAATTACAACAAACATTTGTGTGTTATAGACAAGGTTTTAGAGAGGATTGTGGTTTAACAAAAGAAAATCAGAAGAGTGATGTAAAGCTAGAGACAAGGTGTGGTTGTGAAGCAAAGCTTAGAGCGCATATTGAGATGGCTTCAAAGTGGTGA 330 0.3727 MSMDNSGEGLSWLNESVAFMCTKQKFISLEMAYQFYHWFGRVNGFSVRRSFVLQSSKGEKLQQTFVCYRQGFREDCGLTKENQKSDVKLETRCGCEAKLRAHIEMASKW 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1358 109 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 23 105 - -
Aed5g1358 109 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 105 - -
Aed5g1358 109 Pfam FAR1 DNA-binding domain 34 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1358 Aed-Chr5 13738233 13738963 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed5g1358 FAR1 1.5e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1358 - K17604 mtr:MTR_1g070355 121.709