Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1347 ATGGAAGCCAGCGCTGGACTGGTCGCTGGCTCGCATAACCGCAATGAACTTGTTGTTATTCATGGCCATGAAGAGTGTGTGAGATATGTGGTGATGGAGTGGGTCTCACAGTGGATGGAGACTTGTTTGTGGCTTGCAATGAGTGTGGTTTTCCAGTGTGCAGGCCTTGCTATGAGGAGCCCCCGGGTGGAGGGAGATGATGATGAAGATGATTTGGATGATATTGAGCATGAATTCAACATTGATGACCAAAAGAACAAGCATGGCCAGGTCGCAGAAGCCATGCTTCATGGGAAGATGAGCTATGGAAGAGGTCCTGAAGATGATGAACATTCCCATTTCCCAACGCCTGTAAGTGGGGAGTTTGCAATATCATCTAATGGTTATGGAGATCAGATGTTATCTTCTCAAATGCATAAAAGAGTGCATCCATATCCAATGTCTGAACCTGGAAGTGCAAGATGGGATGAAAAGAAAGAGGAAGGATGGAAAGATAGAATGGAAGATTGGAAATTGCAGCAAGGCAATTTGGGGCCGGAACCCGATGAAGATCCAGATGCAGCCATGTTAGATGAAGCAAGGCAACCACTGTCAAGGAAAATACCAATAGCATCTAGCAAGATCAATCCCTATAGAATGGTGATTGTGGCGCGTCTTGTAATTCTTGCTTTCTTCCTCAGATACAGGCTCATGAACCCGGTTCATGATGCAATGGGGCTGTGGCTAACCTCTATCATATGTGAAATCTGGTTTGCTTTTTCATGGATTCTGGATCAGTTTCCCAAATGGTTCCCCATTGATAGAGAGACCTACCTTGACCGTCTTTCCATGAGGTATGAGCGTGAGGGTGAACCAAACATGCTTGCTCCAGTAGATGTCTTTGTGAGTACAGTGGATCCCATGAAGGAGCCTCCTCTGGTCACAGGAAACACTGTGCTTTCAATCTTGGCAATGGATTACCCAGTTGATAAGATTTCATGCTACATTTCTGATGATGGAGCCTCAATGTGCACATTTGAGTCCTTATCAGAAACTGCAGAGTTTGCTAGAAAATGGGTACCCTTTTGTAAGAAATTTTCTATTGAACCTCGTGCACCTGAGATGTACTTCAGTGAGAAGATTGATTACTTAAAGGACAAAGTGCAACCCACATTTGTTAAGGAGCGTCGAGCTATGAAGAGGGAATACGAAGAGTTTAAGGTTAGGATCAATGCCCTTGTTGCAAAGGCTCAGAAAGTTCCTCAAGGAGGATGGATCATGCAGGATGGAACACCATGGCCAGGGAACAACACTAAGGATCATCCTGGTATGATTCAAGTGTTTCTTGGTAGCAGTGGAGGCCTTGATACTGAAGGAAACGAGCTTCCTCGCCTAGTTTATGTTCGGGTATCTGCTGTTCTCACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCACTATGTCAATAACAGCAAGGCTGCTCGAGAGGCCATGTGCTTCTTGATGGACCCCCAAACTGGGAAGAAGGTCTGCTATGTCCAATTTCCTCAAAGATTCGATGGTATTGACGCGAACGATCGTTATGCCAACAGGAACACGGTTTTCTTTGATATTAACATGAAGGGCCTAGATGGAATTCAAGGTCCTGCATATGTGGGTACTGGATGTGTTTTCAGGAGGCAAGCTTTGTATGGCTATAATCCTCCAAAGGGTCCCAAGCGTCCAAAAATGGTAAGCTGTGACTGTTGCCCTTGTTTCGGAAGCCGAAAGAAGTACAACAAGGAGAAGAGTGATGCAAATCATGGAGAGGATGCAACCCTTAAAGTGATGGATGATGACAAAGAGATGCTGATGTCCCATATGAATTTTGAGAAGAGATTTGGACAATCCTCTATTTTTGTGACTTCTACTTTGATGGAAGAGGGTGGTGTGCCTCCTTCTTCAAGTCCTGCTGCTCTGCTTAAAGAAGCCATTCATGTGATCAGTTGTGGATATGAAGATAAAACTGAATGGGGACTTGAGCTTGGTTGGATCTACGGATCCATCACAGAAGACATTCTAACAGGTTTCAAGATGCACTGCCGCGGGTGGAGATCCATCTATTGTATGCCAAAGAGAGCTGCATTCAAGGGCACTGCTCCAATCAACTTGTCAGATCGTCTCAACCAGGTTCTTCGTTGGGCACTTGGTTCCATTGAGATTTTCTTCAGCCACCATTGCCCTCTCTGGTATGGCGTGAAGGAAAAGAAGCTCAAGTGGCTCGAGAGATTCGCCTATGCAAACACCACTATCTATCCATTCACCTCCATTCCCCTCGTTGCTTACTGCATTCTTCCTGCTATTTGCTTGCTCACTGACAAATTCATTATGCCACCGATTAGCACCTTTGCCAGCCTCTACTTCGTTGCCCTCTTCTCCTCAATCATGGCCACCGGCATCCTCGAGCTCAAATGGAGCGGAGTGAGCATCGAGGAATGGTGGAGAAACGAGCAGTTCTGGGTCATCGGCGGCGTATCAGCGCATCTCTTTGCAGTCATACAAGGCCTGCTAAAGGTCCTGGCCGGTATCGACACCAACTTCACAGTCACAGCCAAAGCCGTAGACGACGAGGACTTCGGAGAATTGTACACCTTCAAGTGGACCACCCTCCTGATCCCTCCAACCACCATCCTGATCATCAACATCGTTGGCGTGGTTGCCGGGATCTCCGACGCCATCAACAACGGGTACCAGTCGTGGGGCCCACTGTTCGGGAAGCTCTTCTTCTCGTTCTGGGTGATTGTCCATCTGTATCCGTTCCTCAAGGGCTTGATGGGTCGCCAGAACCGCACTCCCACCATTGTTGTGATTTGGTCTGTGCTTTTGGCTTCTATTTTCTCGTTGCTGTGGGTGAGGATTGATCCGTTTGTGCTCAAGACTAAGGGGCCTGATACAAAGTTATGCGGAATCAACTGCTAG 2940 0.4684 MEASAGLVAGSHNRNELVVIHGHEECVRYVVMEWVSQWMETCLWLAMSVVFQCAGLAMRSPRVEGDDDEDDLDDIEHEFNIDDQKNKHGQVAEAMLHGKMSYGRGPEDDEHSHFPTPVSGEFAISSNGYGDQMLSSQMHKRVHPYPMSEPGSARWDEKKEEGWKDRMEDWKLQQGNLGPEPDEDPDAAMLDEARQPLSRKIPIASSKINPYRMVIVARLVILAFFLRYRLMNPVHDAMGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSMRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTGNTVLSILAMDYPVDKISCYISDDGASMCTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPQGGWIMQDGTPWPGNNTKDHPGMIQVFLGSSGGLDTEGNELPRLVYVRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQTGKKVCYVQFPQRFDGIDANDRYANRNTVFFDINMKGLDGIQGPAYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGSRKKYNKEKSDANHGEDATLKVMDDDKEMLMSHMNFEKRFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGVKEKKLKWLERFAYANTTIYPFTSIPLVAYCILPAICLLTDKFIMPPISTFASLYFVALFSSIMATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTAKAVDDEDFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1347 979 Coils Coil 389 409 - -
Aed5g1347 979 Pfam Cellulose synthase 291 973 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed5g1347 979 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 462 561 IPR029044 -
Aed5g1347 979 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 60 979 - -
Aed5g1347 979 SUPERFAMILY Nucleotide-diphospho-sugar transferases 305 795 IPR029044 -
Aed5g1347 979 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 60 979 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1347 Aed-Chr5 13592619 13601612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1347 1 979 Cell Wall Biosynthesis AT5G17420 77.906 0.0 1620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1347 K10999 - gmx:100815436 1835.46