Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g1325 | ATGGAAGAAGAGACGCAGCAGCAACGAGTCACTCACTCGTCCGTCTCCACTGAGTCACGCACTTCTGATGAACCGCCACCCAACTCGGAAACCCTAGCTATCCGCTCTTCGCCTCCTCTGCATGACGACCATGCCACTCATACGCAGGGAAGCTCTACCGCACGGAAGGCTGAAAAAGCTGAGAGTAAGGTGTCAGCCCAGCCTCCTGACGAGGAAACTATTGTAAAAGATGCAGTTGAGGCACCTCAAAAACAGATAGAAAAACAACTTCAGGTGTCTGTTTGTTCAACTTCTGTTTCACAGTCTTTATCATCTGCCCCTAGTCCAACTGTACCAGAACAGAGACCATCTCCTCCTACGGCTAATAGTGTACAAGTGCCAAAAGTAGACAAAGGAACACCTTCTGATGGTACACCTTTATCTTCTGTTTCTGTTGCAAGGGCATCTGTATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTATGGGTTTTCGAAGCTATTACAGGTGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTTTGTGACCATTCAGGACATGTGATAGAGATTGTTTATAAAAGTCAACATAGTCATGATCCCCCGCATAAAATTGATATCACTAAGGAAAGTAAACTCCTGCCTTCCAGTGAACCTAAAGTAGAAAGCAGTGTACCAAAGAAGTCCACCAGAGTTCTGAATGATTGTGATCCATCACCTTCTCCAAAAGAACCTTTACAAGAAGCACCTTGCAGTGGTGATAAGAATCTAGAAAACTCATCTAATGGTGAGAATGCAGTAAAACCGAGCAAGAAACCAAAGTTTGTTGTACATGCTGCAGAGGATGTCGGGATATCAGGTGATGGATACCGGTGGCGCAAGTATGGGCAAAAGTTGGTGAAGGGAAATCCACATTTCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCAGTTCGAAAGCACATCGAGACTGCTGTGGATAACCCAAAAGCTCTCATCATAACATACAAGGGAGTGCATGATCATGACATGCCTGTGCCAAAGAAACGACACGGACTGCCAAGTGCTTCGCTTGTGGCTGCCGCAGCACCCACTTCAATGAACAATCTGCAGTTCAAAAAAACTGGCTTGCTACAACAAAACCAGGAAACTGAAGAAGCTCAGTGTTCAGAGGACACAGAAGGAGAATTAACTGGGGAAGCGTTGGACCTTGGGGGTGAGAAAGCAATCGAGTCGGCTCGAACGCTTTTGAGCATAGGTTTTGAAATCAAACCTTGTTGA | 1305 | 0.4552 | MEEETQQQRVTHSSVSTESRTSDEPPPNSETLAIRSSPPLHDDHATHTQGSSTARKAEKAESKVSAQPPDEETIVKDAVEAPQKQIEKQLQVSVCSTSVSQSLSSAPSPTVPEQRPSPPTANSVQVPKVDKGTPSDGTPLSSVSVARASVSDGYNWRKYGQKQVKSPMGFRSYYRCTHSNCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDITKESKLLPSSEPKVESSVPKKSTRVLNDCDPSPSPKEPLQEAPCSGDKNLENSSNGENAVKPSKKPKFVVHAAEDVGISGDGYRWRKYGQKLVKGNPHFRNYYRCTSAGCPVRKHIETAVDNPKALIITYKGVHDHDMPVPKKRHGLPSASLVAAAAPTSMNNLQFKKTGLLQQNQETEEAQCSEDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC | 434 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g1325 | 434 | MobiDBLite | consensus disorder prediction | 97 | 143 | - | - | |
Aed5g1325 | 434 | Coils | Coil | 375 | 395 | - | - | |
Aed5g1325 | 434 | MobiDBLite | consensus disorder prediction | 202 | 280 | - | - | |
Aed5g1325 | 434 | PANTHER | WRKY TRANSCRIPTION FACTOR 32-RELATED | 266 | 432 | - | - | |
Aed5g1325 | 434 | SUPERFAMILY | WRKY DNA-binding domain | 148 | 209 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
Aed5g1325 | 434 | MobiDBLite | consensus disorder prediction | 202 | 223 | - | - | |
Aed5g1325 | 434 | Gene3D | WRKY domain | 140 | 210 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | Gene3D | WRKY domain | 278 | 354 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | PANTHER | WRKY TRANSCRIPTION FACTOR 32-RELATED | 5 | 270 | - | - | |
Aed5g1325 | 434 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 266 | 432 | IPR044810 | GO:0003700 | |
Aed5g1325 | 434 | SUPERFAMILY | WRKY DNA-binding domain | 288 | 353 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 5 | 270 | IPR044810 | GO:0003700 | |
Aed5g1325 | 434 | SMART | WRKY_cls | 293 | 352 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | SMART | WRKY_cls | 150 | 208 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | MobiDBLite | consensus disorder prediction | 8 | 35 | - | - | |
Aed5g1325 | 434 | MobiDBLite | consensus disorder prediction | 260 | 274 | - | - | |
Aed5g1325 | 434 | ProSiteProfiles | WRKY domain profile. | 288 | 353 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | Pfam | WRKY DNA -binding domain | 152 | 206 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | Pfam | WRKY DNA -binding domain | 295 | 350 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g1325 | 434 | MobiDBLite | consensus disorder prediction | 117 | 143 | - | - | |
Aed5g1325 | 434 | ProSiteProfiles | WRKY domain profile. | 145 | 209 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g1325 | Aed-Chr5 | 13111567 | 13118168 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g1325 | 90 | 434 | WRKY Transcription Factor Family | AT4G30935 | 52.186 | 2.04e-112 | 337 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed5g1325 | WRKY | 5.6e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g1325 | - | - | gmx:100800480 | 667.922 |