Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1318 ATGCCTAATGCCAAACACATATTGGCATGCATAAGAAGAGACATCAAGAAACTAAACTTGAAATCCATTAGGAAACACCACATTGGCCTAGTGCAACAAGAACCGGCTCTTTTCGCAACAACAATTTACGAAAACATTCTTTATGGCAAGGAAGGAGCCTCAGAAGCAGAAGTGACTGAAGCAGCAAAACTCGCCAATGCTCATAGCTTCATCAGTTCTCTTCCTGAGGGCTACTCCACAAAAGTGGGTGAGAGAGGAGTTCAACTCTCTGGTGGCCAGAAACAAAGGGTAGCCATTGCCAGAGCGGTTCTGAAAAATCCAGAAATTTTGCTACTAGATGAGGCAACCAGTGCATTGGATTTGGAGTCCGAGCGTGTGGTGCAACAGGCTCTAGATAAATTGATGCAGAACAGAACAACGGTTATTGTGGCACATAGACTATCCACAATAACAAATGCAGATCAAATTGCGGTTTTGGAGGATGGAAAGGTAATTCAGAGAGGGACTCATGCAAGGCTTGTGGTGGATACTGATGGAGCATACTACAAATTAGTCAACCTTCAACAACAACAACAAGAAGAACATGTGCAAGAACATAATGATTGA 606 0.4307 MPNAKHILACIRRDIKKLNLKSIRKHHIGLVQQEPALFATTIYENILYGKEGASEAEVTEAAKLANAHSFISSLPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDLESERVVQQALDKLMQNRTTVIVAHRLSTITNADQIAVLEDGKVIQRGTHARLVVDTDGAYYKLVNLQQQQQEEHVQEHND 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1318 201 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 186 IPR003439 GO:0005524
Aed5g1318 201 ProSitePatterns ABC transporters family signature. 89 103 IPR017871 GO:0005524
Aed5g1318 201 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 13 192 IPR039421 -
Aed5g1318 201 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 13 192 - -
Aed5g1318 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 188 IPR027417 -
Aed5g1318 201 Pfam ABC transporter 13 117 IPR003439 GO:0005524
Aed5g1318 201 Gene3D - 14 189 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1318 Aed-Chr5 12958327 12959004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1318 2 193 Calmodulin-binding Proteins AT2G36910 59.067 4.51e-67 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1318 K05658 - gmx:100809752 305.834