Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g1314 | ATGGGTTTGGGAGTGTTTGGTTCTATTCTAGTTCTGACACTCTTCTTCAAATACCTGGCATCTCAGCAACCAAACACTGATGATTTCTTTGTGTGTGAATTTTTCAAGAAGATGGGTTTGGAATCCTCCAAAGTCCACAACTTTTCAGCTTCTGTTTGTTCATGGAACGGGGTTTCATGTGATGCCAAGAGAGAACATGTTGTTGGGTTAGTCTTTTCTGGCATTGGCCTCTCTGGTCCCATTCCAGACACCACCATAGGAAAACTCACCAAGCTTCAATCTTTGGACCTTAGCCACAACAAAATCACTGATTTGCCTTCTGATTTCTGGAGCTTTGGCCTTCTCAAGAGCCTCAACCTCTCCTCCAACCAGATTTCTGGTTCATTGACTAACAACATTGGAAACTTTGGCTTGCTTCAAGTGTTTGACTTGTCCAACAACAATCTTTCTGGCCAGATACCTGAAGATATTAGTTCCCTGATGAGTCTGAGAGTCCTCAAACTTGACCACAACAGGTTTGAGCAAAGAATACCCTCTGGGATTCTCAAGTGCAAGTCTCTAGTTTCCATTGACCTTTCTTCAAATCAGCTAAGTGGGGCAGTCCCAGATGGTTTTGGTGATGCTTTTCCTAATCTTGTTACCTTGAACCTTTCTAGGAATAGTATTAATGGCAGTGATTCAGATATTTCACGCAATTCCTCTCATGGTTCTTTGATGAGTTTGTTTCATGGAAGGGTTAAGGTCTTGGACCTTAGCAGAAACCAATTTGAAGGTCACATTTCTCAGGTACATTCCATCTCTAACTACAATTGGTCTCATTTAGTTTATCTTGATTTGTCAGAGAATCAGCTGGGTGGGGAGATTTTCCAAAATCTGAATGAATCCAAGAATCTAAAGCACCTTAATCTTGCTCACAATAGATTTATAAGTCAGAAATTCCCCAAGATTGAAATGCTCTCAGGATTGGAATATCTGAACTTGTCCAAAACTAGTCTTATTGGTCACATTCCTGCTGAAATCTCACACCTAGGTAATTTGAGAGCACTTGATGTTTCTATGAATCATCTTATAGGGAAAGTCCCTTCACTAACCAATAATAAACATCTCCAAATTCTTGATCTTTCAAACAACAATTTGAGTGGTGATGTCCCTTCATCAGTCATAGAGAAACTTCCCTCAATGGAGAAATACAACTTCTCTTATAACAACTTGACCTTCTGTGCATTGGAAACCAAATCAGCTATCCTCCAAGCAGCATTCTATGGATCATTCAACAGTTGCCCAATTGCTGCAAACCCAAGTATTCTGAAAAAAAGAGCCACTCAAGACAAGGGAATGAAGCTAGCTCTGGCATTGACCCTCTCAATGATCTCATTGATTGCAGGGCTTTTGCTTCTAGCATTTGGTTGCCTCAAGAAAACAAAACCATGGCCTGTTGTGAAGCAAGCCTCATACAAAGAAGAGCAAAACAACATGTCAGGTCCCTTTTCATTCCACACTGACTCAACCACTTGGGTGGCTGATGTCAAGCAAGCAACATCTGTGCCAGTAGTAATCTTTGACAAGCCACTGCTGAACATCACATTTGCAGACCTATTGGCTGCAACTTCAAATTTTGATAGGGGCACCCTTTTGGCTGAAGGGAAATTTGGACCTGTTTATAGAGGCTTTCTACCTGGTGGCATTCATGTAGCAGTTAAAGTTTTGGTTTTTGGATCCACTCTTACAGATAAAGAAGCTGCAAGAGAGCTTGAGTATCTTGGTAGAATCAAGCACCCCAATCTTGTTCCTCTAACTGGCTATTGTGTAGCTGGGGACCAGAGGATTGCAATATATGACTACATGGAGAATGGAAACTTGCAAAATTTGCTCTACGACTTGCCACTCGGTGTACTACAACAAAGAACAGATGATTGGAGCACAGATACATGGGAAGAACATGAACAACATGACAGTAATGGTATTCAAAATGCTGGTTCAGAAGGGGTGCTCACAACATGGAGATTTCGCCACAAAATTGCACTCGGCACCGCCCGAGCACTGGCATTTCTGCACCATGGATGCTCCCCACCAATCATCCACAGAGATGTCAAAGCTAGCAGTGTTTACTTGGACTACAACTTGGAGCCGAGGTTGTCGGATTTTGGTCTGGCCAAGATTTTTGGGAGTGGCTTGGATGATGATGAGGACATTGCACTTTGTTCACCTGGCTATGTTCCACCAGAGTTTTCTCAGACAGAGTTTGACACCTCAACACCTAAATCCGATGTGTACTGTTTCGGAGTAGTTCTCTTTGAGTTACTAACTGGGAAAAAGCCGGTTGGAGATGATTACCCTGATGAGAAGGAAGCAAGTTTGGTTAGTTGGGTGAGAGGACTAGTGAGAAAGAACAAAGCTTCAAGAGCTATTGATCCGAAGATTCGTGACACCGGAGCGGAGGAGCGAATGGAGGAGGCTCTAAAGGTTGGTTATCTTTGCACTGCTGATCTTCCTTCAAAGCGACCAAGCATGCAGCAGATAGTTGGACTTCTTAAAGATATTGAACCTTCTGCTGCTAATTAG | 2562 | 0.4251 | MGLGVFGSILVLTLFFKYLASQQPNTDDFFVCEFFKKMGLESSKVHNFSASVCSWNGVSCDAKREHVVGLVFSGIGLSGPIPDTTIGKLTKLQSLDLSHNKITDLPSDFWSFGLLKSLNLSSNQISGSLTNNIGNFGLLQVFDLSNNNLSGQIPEDISSLMSLRVLKLDHNRFEQRIPSGILKCKSLVSIDLSSNQLSGAVPDGFGDAFPNLVTLNLSRNSINGSDSDISRNSSHGSLMSLFHGRVKVLDLSRNQFEGHISQVHSISNYNWSHLVYLDLSENQLGGEIFQNLNESKNLKHLNLAHNRFISQKFPKIEMLSGLEYLNLSKTSLIGHIPAEISHLGNLRALDVSMNHLIGKVPSLTNNKHLQILDLSNNNLSGDVPSSVIEKLPSMEKYNFSYNNLTFCALETKSAILQAAFYGSFNSCPIAANPSILKKRATQDKGMKLALALTLSMISLIAGLLLLAFGCLKKTKPWPVVKQASYKEEQNNMSGPFSFHTDSTTWVADVKQATSVPVVIFDKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVFGSTLTDKEAARELEYLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVLQQRTDDWSTDTWEEHEQHDSNGIQNAGSEGVLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSGLDDDEDIALCSPGYVPPEFSQTEFDTSTPKSDVYCFGVVLFELLTGKKPVGDDYPDEKEASLVSWVRGLVRKNKASRAIDPKIRDTGAEERMEEALKVGYLCTADLPSKRPSMQQIVGLLKDIEPSAAN | 853 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g1314 | 853 | Pfam | Leucine rich repeat | 81 | 125 | IPR001611 | GO:0005515 | |
Aed5g1314 | 853 | Pfam | Leucine rich repeat | 297 | 356 | IPR001611 | GO:0005515 | |
Aed5g1314 | 853 | SMART | LRR_typ_2 | 319 | 343 | IPR003591 | - | |
Aed5g1314 | 853 | SMART | LRR_typ_2 | 112 | 136 | IPR003591 | - | |
Aed5g1314 | 853 | SMART | LRR_typ_2 | 367 | 390 | IPR003591 | - | |
Aed5g1314 | 853 | SMART | LRR_typ_2 | 160 | 184 | IPR003591 | - | |
Aed5g1314 | 853 | SMART | LRR_typ_2 | 89 | 111 | IPR003591 | - | |
Aed5g1314 | 853 | SMART | LRR_typ_2 | 209 | 232 | IPR003591 | - | |
Aed5g1314 | 853 | SMART | LRR_typ_2 | 185 | 207 | IPR003591 | - | |
Aed5g1314 | 853 | Gene3D | Phosphorylase Kinase; domain 1 | 499 | 614 | - | - | |
Aed5g1314 | 853 | Gene3D | Transferase(Phosphotransferase) domain 1 | 649 | 853 | - | - | |
Aed5g1314 | 853 | PANTHER | CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 849 | - | - | |
Aed5g1314 | 853 | PRINTS | Leucine-rich repeat signature | 343 | 356 | - | - | |
Aed5g1314 | 853 | PRINTS | Leucine-rich repeat signature | 92 | 105 | - | - | |
Aed5g1314 | 853 | Gene3D | Ribonuclease Inhibitor | 233 | 313 | IPR032675 | - | |
Aed5g1314 | 853 | Gene3D | Ribonuclease Inhibitor | 182 | 232 | IPR032675 | - | |
Aed5g1314 | 853 | SUPERFAMILY | L domain-like | 42 | 406 | - | - | |
Aed5g1314 | 853 | SUPERFAMILY | Protein kinase-like (PK-like) | 517 | 844 | IPR011009 | - | |
Aed5g1314 | 853 | SMART | LRR_sd22_2 | 271 | 294 | - | - | |
Aed5g1314 | 853 | SMART | LRR_sd22_2 | 366 | 393 | - | - | |
Aed5g1314 | 853 | SMART | LRR_sd22_2 | 295 | 321 | - | - | |
Aed5g1314 | 853 | SMART | LRR_sd22_2 | 89 | 107 | - | - | |
Aed5g1314 | 853 | Pfam | Protein tyrosine and serine/threonine kinase | 543 | 842 | IPR001245 | GO:0004672|GO:0006468 | |
Aed5g1314 | 853 | Pfam | Leucine Rich repeat | 365 | 381 | IPR001611 | GO:0005515 | |
Aed5g1314 | 853 | Pfam | Leucine Rich repeat | 272 | 287 | IPR001611 | GO:0005515 | |
Aed5g1314 | 853 | Gene3D | Ribonuclease Inhibitor | 30 | 181 | IPR032675 | - | |
Aed5g1314 | 853 | Gene3D | Ribonuclease Inhibitor | 314 | 427 | IPR032675 | - | |
Aed5g1314 | 853 | ProSiteProfiles | Protein kinase domain profile. | 539 | 851 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed5g1314 | 853 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 1 | 849 | - | - | |
Aed5g1314 | 853 | ProSiteProfiles | Leucine-rich repeat profile. | 91 | 112 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g1314 | Aed-Chr5 | 12874982 | 12877543 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g1314 | 70 | 847 | Receptor kinase-like Gene Family | AT5G07280 | 31.377 | 7.48e-112 | 368 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-2 | Aed5g1314 | PK_Tyr_Ser-Thr | 9.5e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g1314 | - | - | gmx:100807051 | 1500.34 |