Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1303 ATGTCAATTGAGATTGGATTGGCAAACAAAGCAAAGGATTTGTGTTGGTATCGCTTGGCTTACCTTCATGAAAAGTTCAGACTGAAGATTATTCATAGGAACATCAAGGCCACTAATGCGTTGTTGGATAAAGATCTCAATCCCAAGATATCTTATTTTGGTTTGGCCAAGCTTGATGATGGGGACAAAACCCATTTGAGCACCAAAATTGTACATTTCTTCAAAGATAATGGTAACCTAATAGAGATTGTGGATCAAAGGTTGGGTGAAGACTTCAATAAAAAGGAGGCAATGATGATGATCAATGTAGCCCCTTTATGCACCGAATTTTCTCTAGCACTCAGGCCCACCATGTCTTTAGTGGTAAGCATGCTTGAAGGTACAACATGTATTCAAGAGATAAAGTCAGATACAAGAGAAGTATTGGATGATGAGAATTATGAGAACGATGCTATAATATTACCAAAATATAGGACAAAGTAA 483 0.3727 MSIEIGLANKAKDLCWYRLAYLHEKFRLKIIHRNIKATNALLDKDLNPKISYFGLAKLDDGDKTHLSTKIVHFFKDNGNLIEIVDQRLGEDFNKKEAMMMINVAPLCTEFSLALRPTMSLVVSMLEGTTCIQEIKSDTREVLDDENYENDAIILPKYRTK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1303 160 Gene3D Transferase(Phosphotransferase) domain 1 71 150 - -
Aed5g1303 160 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 19 70 - -
Aed5g1303 160 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 70 - -
Aed5g1303 160 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 139 - -
Aed5g1303 160 SUPERFAMILY Protein kinase-like (PK-like) 19 130 IPR011009 -
Aed5g1303 160 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 77 139 - -
Aed5g1303 160 Gene3D Transferase(Phosphotransferase) domain 1 11 70 - -
Aed5g1303 160 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1303 Aed-Chr5 12696070 12697315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1303 19 132 Receptor kinase-like Gene Family AT1G53420 41.071 2.77e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed5g1303 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1303 - - pvy:116124462 144.436