Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1284 ATGGAATCCCATAGTGAAGAGATGAATGCTACAAAATTGGTTGAAGCTCAAACCCACGTATGGAATCATATTTTCCAATTCATAAACTCTTTTTCCCTTAAATGTGCCGTTGACTTAAGCATACCCGATATCATACACAACTATGGCCAACCTATGCCACTCTCAAAACTCATTGCTTCACTACCAATTCACCCATCCAAGACATGTTTCATCTACCGTTTGATGCGAATTTTGACTCATTCTGGTTTCTTCAATCAATCACACAATAATGTTGTCACAAAAAATGATGTACAAGAAGTAAGGTATGTGCTAACCGATGCATCTAGGTTACTACTACTTAAGGACGACCAATCCTTAATGAGTACTATAGCATCTTTGGTGCAAGCCCTAACTGATCCAATTAATGTTAATCCATGGAATCAACTATCTACTTGGTTCACAAATGAAGACCCTACACCATTTCAAACACAACATGGGATGACATTTTGGGACTTGACTGCACGTGATCATAGATTCAACAACCTTTTTAATGATGCCATGGCTAGTGACACTCAATTGGTTTCTAGTGTGGTCATTGAAAAGTGCAAGGGGGTGTTTGAGGGATCTGAGTCATTGGTTGATGTTGGAGGAGGGACAGGGACTATGGCTATGGCAATTGCCAAGTCATTCCCACAGCTAAAGTGCATTGTATTTGATCTCCCACAGGTTGTTGCTGACTTGCAAGGCACTGAGAACATAAAATATTGGGTGCTACATAATTGGAACGACGAGGAATGTGTGAAGATACTGAATAATTGCAAGGATGCATTAACTAGCGACGGAACGGTTATTATCATAGACTTGGTGATGGAGAACAATAAGAAGGAAGAAGACCATAAATTAATTGAGACGCAGTTGTTCTTTGATATGCAGATGATGATGGTGGTCACTGGAAAAGAAAGAAATCAGAAAGAATGGGCCAAGCTGATTTTTTCTGCTGGGTGGGTGACAACGCATGGACGGACAGGAATGGAGAAGGAATTGGGAATGATGGTGCAAATGGGTGAAAGGGAGAGGATTGTGGGTGTAGGGTTGGGGTTGGGGTGCTGA 1089 0.4123 MESHSEEMNATKLVEAQTHVWNHIFQFINSFSLKCAVDLSIPDIIHNYGQPMPLSKLIASLPIHPSKTCFIYRLMRILTHSGFFNQSHNNVVTKNDVQEVRYVLTDASRLLLLKDDQSLMSTIASLVQALTDPINVNPWNQLSTWFTNEDPTPFQTQHGMTFWDLTARDHRFNNLFNDAMASDTQLVSSVVIEKCKGVFEGSESLVDVGGGTGTMAMAIAKSFPQLKCIVFDLPQVVADLQGTENIKYWVLHNWNDEECVKILNNCKDALTSDGTVIIIDLVMENNKKEEDHKLIETQLFFDMQMMMVVTGKERNQKEWAKLIFSAGWVTTHGRTGMEKELGMMVQMGERERIVGVGLGLGC 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1284 362 SUPERFAMILY "Winged helix" DNA-binding domain 12 112 IPR036390 -
Aed5g1284 362 Pfam O-methyltransferase domain 139 239 IPR001077 GO:0008171
Aed5g1284 362 Pfam O-methyltransferase domain 248 328 IPR001077 GO:0008171
Aed5g1284 362 Gene3D Vaccinia Virus protein VP39 249 338 IPR029063 -
Aed5g1284 362 Gene3D Vaccinia Virus protein VP39 117 248 IPR029063 -
Aed5g1284 362 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Aed5g1284 362 PIRSF O-mtase 1 248 IPR016461 GO:0008168
Aed5g1284 362 PIRSF O-mtase 246 345 IPR016461 GO:0008168
Aed5g1284 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 349 IPR016461 GO:0008168
Aed5g1284 362 PANTHER O-METHYLTRANSFERASE 8 329 IPR016461 GO:0008168
Aed5g1284 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 330 IPR029063 -
Aed5g1284 362 Gene3D - 2 111 IPR036388 -
Aed5g1284 362 PANTHER ORCINOL O-METHYLTRANSFERASE 8 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1284 Aed-Chr5 12242234 12248713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1284 32 328 Monolignol Biosynthesis Gene Families AT5G54160 29.154 1.30e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1284 - K16040 gmx:100781008 422.55