Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1278 ATGTATACTATAACATTGGACTTCCAATCCAATAAACCAATTATTATAGACACTTTAATTACTTTGGAAATGAAAGTTGAAGCAGCAGCAGCAACAACGATGATGTTTGCAGGAGTTTGTGTTGCAATTGTTGTGATACTCGTAACGAAAGCAGTGAGTTGGGTGTGGGTGGAGCCGAAAAGAGCAGAGAGATACCTCAGAAGACAAGGCCTGAAGGGAAACTCATACACGCTGTTCTTTGGAGACATGAAAGCGATTTCTAAGTCGACACATGAAGCAAAATCTAAGCCCATAAACATCAACGATGATGTTGCGCCTCGCCTAGTTCCATTTCAGCATCAATTGGTACAAGATTATGTGCATATTATGGATCCCGAAGCAATAAAAGAGGTTCTGAATATGATAAGTGACTTTCCAAAACCGACCTTAACTCCACTTTCCAAGTTCCTCATAACCGGACTTGTAGACCTTCAGGGTGACAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATCTCATCAAGCTCAAGCTTGTGTTGCCTGCCATGTATCATAGTTGTAACCAGATGATAAACGAATGGAAGAAGTTAGTATCATCAAAAAAAGGATCATCATGTTCATGTATGGTAGATGTTTGGCCTTTCTTAAATAGCTTAACAGGTGATGTGATTTCTCGTACGGCTTTCGGAAGTAACTATGAAGAGGGAAAGATAGTATTTCAACTCCAAAAAGAACAAGCTCAACTTACAGCTAAGGTTTTTCAGTCTATTTATATTCCAGGATGGAGGTTTGTACCAACTAAAATGAACAAGAGGATGAAGGAGATTGACTTTGAAATTCGAACCGTACTTAGTGGAATTATCCAAAAACAAGAAGCAACTATGAAGACATGCAAAGAATCTCCAATAAATGATAACCTATTAGGGTTGTTATTGGAATCCAATCAAAAAGAGATTGAAGATCATCGTGGACACACAACAAAGGATGTTGGAATGAACACCGATGATGTGATTAATGAGTGCAAGTTGTTTTACTTTGCTGGACAAGAAACAACGTCGGTGCTACTTAATTGGACTATGGTGTTATTAAGTAGGTTTCCCAACTGGCAAACACTAGCAAGAGAAGAGGTCATTGAAATTTTTGGCACAAAAGAACCGGACTATGATGGATTAAATCGTCTAAAAGTTGTCACGATGATTTTGTACGAGGTTCTAAGATTATACCCACCCGTCACTGCTATCACAAGAATCCTAAGAAAGGAAACAAGAGTTGGAAACATGACTCTACCAGCAGGAGCACTTGCCATCATTCCAATCGTGTTGGTGCACCATGATTCTGAGTTATGGGGCAGTGATGCAAAAGAGTTCAAGCCAGAAAGGTTCTCAGAAGGAATCTCAAAAGCAACAAATGGTCAAGTTTCGTTTCTCCCATTTGGTTGGGGTCCCCGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCTCTATGCTTGATTTTGCGAAGCTTCTCGTTTGAGATTTCTCCATCATATCTTCATGCTCCATCCACAGTTATAACTGCTCAACCTCAATTTGGCACGTCTATTGTATTACATAAATTATAG 1620 0.3938 MYTITLDFQSNKPIIIDTLITLEMKVEAAAATTMMFAGVCVAIVVILVTKAVSWVWVEPKRAERYLRRQGLKGNSYTLFFGDMKAISKSTHEAKSKPININDDVAPRLVPFQHQLVQDYVHIMDPEAIKEVLNMISDFPKPTLTPLSKFLITGLVDLQGDKWSKHRKIINPAFNLIKLKLVLPAMYHSCNQMINEWKKLVSSKKGSSCSCMVDVWPFLNSLTGDVISRTAFGSNYEEGKIVFQLQKEQAQLTAKVFQSIYIPGWRFVPTKMNKRMKEIDFEIRTVLSGIIQKQEATMKTCKESPINDNLLGLLLESNQKEIEDHRGHTTKDVGMNTDDVINECKLFYFAGQETTSVLLNWTMVLLSRFPNWQTLAREEVIEIFGTKEPDYDGLNRLKVVTMILYEVLRLYPPVTAITRILRKETRVGNMTLPAGALAIIPIVLVHHDSELWGSDAKEFKPERFSEGISKATNGQVSFLPFGWGPRICIGQNFALLEAKMALCLILRSFSFEISPSYLHAPSTVITAQPQFGTSIVLHKL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1278 539 PANTHER CYTOCHROME P450 72A11-RELATED 54 530 - -
Aed5g1278 539 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS E-class P450 group I signature 477 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS E-class P450 group I signature 487 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS E-class P450 group I signature 338 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 SUPERFAMILY Cytochrome P450 115 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 Gene3D Cytochrome P450 55 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 Pfam Cytochrome P450 117 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS P450 superfamily signature 487 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS P450 superfamily signature 478 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1278 539 PANTHER CYTOCHROME P450 FAMILY MEMBER 54 530 - -
Aed5g1278 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 480 489 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1278 Aed-Chr5 11963599 11971369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1278 23 539 Cytochrome P450 AT3G14690 54.151 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1278 - - gmx:100780475 885.945