Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1257 ATGGGAAATAGGTTCTATCTTTCAGTGCTTCTGGTTTTGGTAACAGTTTTACTTTCAATTTTTAATTCAGAGCAACTTCAATCCTCTGACTCCAAGACCCTTCTAAGAATTCAACATCTATTGAACTTTCCATCTGTTCTAAGCAGCTGGAACAAGAACACAGACTTTTGCAGCACAGATTCAACATCTTCTCTCACTGTTGTGTGCTATGAGGGCACCATAACTCAGCTCCACATAGTTGGCGAAACGAGAGCTCTACTTCTCCCTAGAAATTTCTCAGTAGATTCATTTTTCACAACACTGGTTAGGCTTCCCACTTTGAAAGTCCTCACTTTGGTTTCTCTTGGCATGTGGGGTTCATTGCCTGGTAAGATTGCTCATTTGTCATCACTGGAAATAGTGAATGTAAGTTCAAATTTTCTGTATGGTTCCATCCCTTTACAGTTCTCGTTGCTGTCACATCTCCAAACACTCATTCTAGATCACAACATGTTTTCTGGCCACCTTCGTGAATGGTTATGGGATTCCTTTCTGGCCTTGACCGTGCTAAGTTTGAAAAACAACTTGTTCAATGGCTCGCTTGGTAGCTTGGAGAATATGAGAATCCTTTCGCTTTCTCACAACCATTTCTATGGACCAGTGCCTGATTTGCACCGAAATTTGGTAATTATGATGACAACCATTTATTTTCCCTATACTAAAGGGTATGTATCTCAAACAATGAAGTTCGGAACAGTTGGTTTGCCTCCTTATCGAGCTTTCTCACTGGAAGAGATTGTAGCAGCTACAGACAACTTTGACTCAGCTTCTTTTATGGGCGAAGGTTCTCAGGGAAAGGATGGTTTACTTGTTGCCATTAGAAGTGTAAAAATGAACAGAAGCTATGGCACTCAAGATTTTATGCATCAAATAGAACAGATATCAAAATACAGGCATCGCCATTTAGTCAGTGTTCTTGGACACTGCTTTGAATGTTATTCGGATGATTCAAGTGCCAGCAGCATATTTATTGTCTTTGAGTATGTACCAAATGGCACGCTCAAGAGCTGGACCTCAGATGGGCACTATAGAAAATACCTGACATGGATGCTATGCATAGAAGCCGCTATTGGAGTAGCAAAGGGCATCCAATTTTTGCACACAGGGATTGTCCCCGGTGTATATTCAAACAATCTCAAAATAATAGATGTTTTACTTGACCAAAATTTTGTTACAAAAATCAGCAGTTATGAGTTGCCTTTGTTATCTAACATGAGAAAGGTAGGGAAAGGTAATCCTTCCGGTTGA 1287 0.4017 MGNRFYLSVLLVLVTVLLSIFNSEQLQSSDSKTLLRIQHLLNFPSVLSSWNKNTDFCSTDSTSSLTVVCYEGTITQLHIVGETRALLLPRNFSVDSFFTTLVRLPTLKVLTLVSLGMWGSLPGKIAHLSSLEIVNVSSNFLYGSIPLQFSLLSHLQTLILDHNMFSGHLREWLWDSFLALTVLSLKNNLFNGSLGSLENMRILSLSHNHFYGPVPDLHRNLVIMMTTIYFPYTKGYVSQTMKFGTVGLPPYRAFSLEEIVAATDNFDSASFMGEGSQGKDGLLVAIRSVKMNRSYGTQDFMHQIEQISKYRHRHLVSVLGHCFECYSDDSSASSIFIVFEYVPNGTLKSWTSDGHYRKYLTWMLCIEAAIGVAKGIQFLHTGIVPGVYSNNLKIIDVLLDQNFVTKISSYELPLLSNMRKVGKGNPSG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1257 428 ProSiteProfiles Protein kinase domain profile. 266 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1257 428 Gene3D Ribonuclease Inhibitor 27 254 IPR032675 -
Aed5g1257 428 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 218 - -
Aed5g1257 428 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 235 424 - -
Aed5g1257 428 Gene3D Transferase(Phosphotransferase) domain 1 255 424 - -
Aed5g1257 428 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 218 - -
Aed5g1257 428 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 235 424 - -
Aed5g1257 428 SUPERFAMILY L domain-like 84 223 - -
Aed5g1257 428 SUPERFAMILY Protein kinase-like (PK-like) 246 410 IPR011009 -
Aed5g1257 428 Pfam Protein tyrosine and serine/threonine kinase 276 412 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1257 Aed-Chr5 11538725 11544401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1257 91 427 Miscellaneous Gene Families AT3G03770 44.681 5.14e-83 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aed5g1257 PK_Tyr_Ser-Thr 2.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1257 - - gmx:100813207 369.777