Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1241 ATGGGTATAGAGATTGTGGAGCCTAACACGTGCATTAGGGGTTGCTGCACCAGTCCCTCTATTCCCCTTCATCTCCCTCCCTCTTCTTATTCTCTCCTCTCTCCTATTGCCCAAGGGGCTGAGAGTGTTGTTTATGAAGGAACTTTGGATGGCAAGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTAATAAGTTTCATAAAGAATTGCAATTGCTCAAGTTGGATCATCCAAGAATAGCGACACTGATTGCGGCCCATGCAAAACCACCGAATTACATGTTTTTCTTCAAGTTATATGAATCTCCAAATCTTGCGCAGAAGTTACATGTGGAAGAGTGGATCCCAACTCTCAATGATGCGCTCGTGATAGCAATGCAGTTAGCAAAGGCTTTGCAATATCTACATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTTGATGAAAATCTTTGTCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGGGAGTTTCTATTGAGAATTGGAAGTCTTTTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTAATTTACATGGCACCTGAAATATTAAGAAAAGAGTTACATACAGAAAAGTCAGATGTGTACAGTTTTGGGATATCAATCAATGAACTTCTAACTGGTGTTGTGCCATATACTGATCTTCGTACAGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAATTAACAGCAGCTGTTGTTTCTGATGGATTACGGCCAGTCCTTGCTGCTGAGGACTTGGGTATACCGTCAATATTATTATCAATGATAAACAAATGCTGGGATGCAAATCCTAATAACAGACCTGCTTTTGATGACGTTGTCAAGGAACTTGATTTAATTATGGAGCACAGTATGTTAAAGAAGGCTGAAGAAATTCATATCAGACCTTATAACTTGCATGTTGATCAACCTGCAGACAAGACTGAACACCTTCTGGCTTATCAAGAGTGTTTTAGCTGGTCCACTTGTGGCAAACTTTTGGCCAGGAGTGCTTCTAGTGCAATTGATTCTTGTTTAATAACTAGGTGTGAATCTTCTGACGAGCCTTCAGTATACCACCCAACACTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTGCCTCATATTTGCAATGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTCTAGAGCTGTACCTGCAGTTTTGCAGACTGCAGGTTTTATGGGCAGTCCTGCTAGTGCACTAGCGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCTTATCGCAAATCCAACAGATCTGTCCAGAAGGATTGGCATCCTGGGTGTACAGCAATTGCTTCTCTTATAGTCAGAAACAAGCTATTTGTTGCCAACATTGGTGATTGCAGGGCAATCTTATGTCGTGCTGAGAGAGAGCGTGTTATTTGTCAGGGGGGCTATGTGCATTGGCAAGTTGATACTTGGAGGATCGGTCTTCCTGCACTTCAGGTTACTCGTTCTATTGGTGACGATGATCTGAAGCCTGCTGTAACTGCAGAACCGGAGATAACTGAGAGTACCTTGTGTCCAGAGGATGAATTTCTGGTCATGGCTAGCGATGGCCTGTGGGATGCCATCAACAGTATGGAGGTCATAAATATAATAAAAGACACTGTTAAAGAGCCTGGAATGTGCTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATCACAGTTATAGTTGTTTTCTTACGCCCTGTATCTACAGCAGAGAGAATTTATTAG 1926 0.4258 MGIEIVEPNTCIRGCCTSPSIPLHLPPSSYSLLSPIAQGAESVVYEGTLDGKRVAVKKPILSTSEDINKFHKELQLLKLDHPRIATLIAAHAKPPNYMFFFKLYESPNLAQKLHVEEWIPTLNDALVIAMQLAKALQYLHNLGIVHRDVKPANILLDENLCPHLTDFGLAEYKNDLKGVSIENWKSFGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRTEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAEDLGIPSILLSMINKCWDANPNNRPAFDDVVKELDLIMEHSMLKKAEEIHIRPYNLHVDQPADKTEHLLAYQECFSWSTCGKLLARSASSAIDSCLITRCESSDEPSVYHPTLSWGSYATCGRRETMEDTHFILPHICNEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTAGFMGSPASALAEAFIRTDAAFRKELDSYRKSNRSVQKDWHPGCTAIASLIVRNKLFVANIGDCRAILCRAERERVICQGGYVHWQVDTWRIGLPALQVTRSIGDDDLKPAVTAEPEITESTLCPEDEFLVMASDGLWDAINSMEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1241 641 Pfam Protein phosphatase 2C 395 624 IPR001932 -
Aed5g1241 641 SMART PP2C_SIG_2 405 631 IPR001932 -
Aed5g1241 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Aed5g1241 641 SMART PP2C_4 380 629 IPR001932 -
Aed5g1241 641 PANTHER - 1 641 - -
Aed5g1241 641 Gene3D Transferase(Phosphotransferase) domain 1 22 340 - -
Aed5g1241 641 PANTHER PROTEIN PHOSPHATASE 2C 1 641 IPR015655 GO:0004722|GO:0006470
Aed5g1241 641 SMART serkin_6 30 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1241 641 SUPERFAMILY Protein kinase-like (PK-like) 18 318 IPR011009 -
Aed5g1241 641 Gene3D - 383 635 IPR036457 -
Aed5g1241 641 SUPERFAMILY PP2C-like 384 633 IPR036457 -
Aed5g1241 641 ProSiteProfiles Protein kinase domain profile. 30 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1241 641 Pfam Protein kinase domain 31 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1241 641 CDD PP2Cc 392 631 IPR001932 -
Aed5g1241 641 ProSiteProfiles PPM-type phosphatase domain profile. 390 631 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1241 Aed-Chr5 11339501 11348476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1241 98 641 PP2C-type Phosphatase Gene Family AT2G40860 62.923 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Aed5g1241 Pkinase 8.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1241 - - gmx:100785390 1158.28