Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1210 ATGGATTTCCCTCCTTACCGTCGATCCCAGTTGCGTAGCAACACTTACTGTGCCCTCGTTCACCTCCTCTCTCACCTTTCTGCGTACAATGCTTCAATTCAACCCCTCAGCACTCCCAGTAATGGCAGTGGTAGAATGGGTCAAGAAAACCAGGAACAGGAGCCTAGGTCTTCTGAAGTTGTTGTTCCTGATTTTTTGGATCCTAAGAATCCTATTCACCAGAAGGATATACAGGAGGTTCAGGAGACCATTGAGAGGGTTGGAGACAAGGATATGGATTTTGCTTCCAACAAGATGGTCCTATATGATATAGAACACATGATGGGAATAGAGGACATGTCTACCCAAGCAAATGGTTTTGATAAGGAGCAGAAGCTAATGAATGAGTTCGAGCTGGTTATGAAAGGAACTGAAGACCTTATTTGTGATGATTTAATCCCCTTGAACTTGGGATTAGATGAGAAACATAATGATGTCAGTGAAGTTGGGTTGATGGATTACCAAGTAGAAATGGAAGAGGGAGAAATTTCTGGAGATTTGGGAATAGATGGCAATTCAATTGATGTGTCTTCTGCTGATGCTTTAATTTTACGACAGATGGAAGTAGATGAAGTTCAGAAGCCTGAAAATCCTTCTAAGATTGAGAATCAAAAAAAGGAAAAAGGCTATGACTCTAATTCCTCTATGGTAAATGCAGTTCAAGATGCCAATAATAGTGGACAAGTGGAGCCTAGAACTAATGGCAAGAAAGGGATTGCATGCAGACTTGAAGTAGCAATTTCTCAAGAAATCATTGAATGTCAGAAGGAAGATAAAACAAAGTTGGATAGTGCTAGTAAAAAGAGTAACCGTGGTGGGAACAAAGGAAAAAAGAAGAAAGCAGATAAAAAGAAGAGAGCGGAAAAGAACAAAAAACTTGGTGTTAAAAGATTGCAGATACGGCATATGTACAGAAACCAAAAGCTGTCTCACATTGTCGCCATTATCTCATGGGAAGGTGCCATGAGAAGATTTCCATATTTAAAAGGTGACAAGTGTCAGTTTTTGCATGATGTGGTGCCTCATACGAAATCCAAGCCATGTACTCACTTTGCTCGTCACTCTTGCATGAAAGGGGATGATTGCCCTTATGATCACCAGCTCTCAAAATATCCTTGTATCAATTTTGTGTCCAAAGGCTCTTGTTATAGAGGTGATGCTTGCTTGTTTGCTCACCAGGTACCAACCAAAGAAGACATCACTACACCTTCAAATATGTGCAGACCAGAGTTGCCTCCACTTCTGTCCGGAAATGCAAATTCCAGCACACCACTTAACTACAACCATGGCTCTAGCTCTGTCCAGAAAAACCGCTTTACTAATTTTGTGGGAATTCATTCAGGCATCAATGTACAGAAACAGCCTATACCCCCTAAAGGAATTAGTTTCATCAATCTTGCAAAACCCAGCCCAAGTTCACTGAATCAAGGCACAGTAACAACCAAGGAAATGCATTTCATAAAACTCAACAAAGTGGAGATTCCTAAGAAATTGCCAGCTGTGACACCTAAGGGAATTAACTTTCTTTCTTTTGGCCAAGGTTCTGTCAAAAGTTTTAAAAGTGCAATTCATTCCAATGTGAATAGGGAAAATGGTGTCAAGTTGCCTCAGTTATTCAATTTTGGTTTGCCTGAGCAGGCAAATTCCTCCCTAAATAAAGATAGTTACAACAAAGCTAGTGACATAAGAAAACAAAATGTACCACAGACTGATCTATTCTTGAATGAGATTTTAGGAAAAAATCAATCTGTGGCAGAAAGAATGATATCAAAGCTTCCAGAGAAAACCTCAGTAGATGTTTTTATGAGGAATCACAGCCATAGTAGATCAGTTCAAGAGGGAAAAACGTCATCTGATATTTCTCAAATTTCAAAAGGCCAAAAGGCACTCTTATCAACTCTGGCATATGCAGCAGAGCATGAATCTGACATTAAGATGAAATAG 1983 0.3979 MDFPPYRRSQLRSNTYCALVHLLSHLSAYNASIQPLSTPSNGSGRMGQENQEQEPRSSEVVVPDFLDPKNPIHQKDIQEVQETIERVGDKDMDFASNKMVLYDIEHMMGIEDMSTQANGFDKEQKLMNEFELVMKGTEDLICDDLIPLNLGLDEKHNDVSEVGLMDYQVEMEEGEISGDLGIDGNSIDVSSADALILRQMEVDEVQKPENPSKIENQKKEKGYDSNSSMVNAVQDANNSGQVEPRTNGKKGIACRLEVAISQEIIECQKEDKTKLDSASKKSNRGGNKGKKKKADKKKRAEKNKKLGVKRLQIRHMYRNQKLSHIVAIISWEGAMRRFPYLKGDKCQFLHDVVPHTKSKPCTHFARHSCMKGDDCPYDHQLSKYPCINFVSKGSCYRGDACLFAHQVPTKEDITTPSNMCRPELPPLLSGNANSSTPLNYNHGSSSVQKNRFTNFVGIHSGINVQKQPIPPKGISFINLAKPSPSSLNQGTVTTKEMHFIKLNKVEIPKKLPAVTPKGINFLSFGQGSVKSFKSAIHSNVNRENGVKLPQLFNFGLPEQANSSLNKDSYNKASDIRKQNVPQTDLFLNEILGKNQSVAERMISKLPEKTSVDVFMRNHSHSRSVQEGKTSSDISQISKGQKALLSTLAYAAEHESDIKMK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1210 660 MobiDBLite consensus disorder prediction 204 222 - -
Aed5g1210 660 MobiDBLite consensus disorder prediction 34 57 - -
Aed5g1210 660 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 165 632 IPR045124 GO:0003723|GO:0045892
Aed5g1210 660 MobiDBLite consensus disorder prediction 271 305 - -
Aed5g1210 660 PANTHER PROTEIN SUPPRESSOR OF SABLE 165 632 - -
Aed5g1210 660 MobiDBLite consensus disorder prediction 204 226 - -
Aed5g1210 660 MobiDBLite consensus disorder prediction 34 59 - -
Aed5g1210 660 SMART c3hfinal6 383 407 IPR000571 GO:0046872
Aed5g1210 660 SMART c3hfinal6 355 381 IPR000571 GO:0046872
Aed5g1210 660 ProSiteProfiles Zinc finger C3H1-type profile. 356 382 IPR000571 GO:0046872
Aed5g1210 660 SUPERFAMILY CCCH zinc finger 384 409 IPR036855 GO:0046872
Aed5g1210 660 Gene3D - 353 418 - -
Aed5g1210 660 ProSiteProfiles Zinc finger C3H1-type profile. 385 408 IPR000571 GO:0046872
Aed5g1210 660 MobiDBLite consensus disorder prediction 284 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1210 Aed-Chr5 10842715 10846839 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aed5g1210 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1210 - - gmx:100816509 939.488