Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1172 ATGGAGTTCCATCATCATGATCAAAAACCTCTATGCCTCTTTTTGCTTCTCCTCACTCTCCTCTCAAGCTCCCAAGCCCTCAAATTCAACGTTGGTGGAAGCCAAGGGTGGGTTCCAAACCCTTCCGAGAGTTACAACAATTGGGCTTCAAGAAACCGGTTCCAAATCAACGACACAATAGTTTTCAAGTACAAGAAGGGTTCGGATTCTGTGTTGGAAGTGAACAAGGAAGATTATGACAAGTGCAACAAGACCAACCCAATCAAGAAATTTGATAACGGTGACACTGAATTCAAGTTTGATCGTTCAGGACCGTTTTACTTCATTAGTGGAAAAGATGGAAACTGTGAAAAGGGTCAGAAGTTAATCGTTGTCGTGTTGTCCCCAAGAACACCACCAACATCATCACCACCAAAAACTTCACCTTTACCACCATCACCAAAGCCAAACCCACCTGCACCGGCACCGTCATCGCCACCCATTTCACCGTCTCCGCCGGTTCAACCTCCTTCAACATCAACACCTCCGGCAAGTTCTCCGGTGCCGTCCGGTGGATCGCCGGTGACATCTCCATCGCCGTCGACTTTATCTCCAACGGCATCTCCGGCACCGGCGACCATGTCTCCGACGGAATCTCCGGCGCCGTCGACCTTATCTCCGGGGCCTACCCCGGCAACTTCAGCGCCACCACCGTTTTCCTCCCCTCTGTCTCCTCCGCCGGCCTCGGGTCCGAATTCGCCCCCACCGACGGGGCAGGGTTCTTCTCCGCCGTCGCAGTTAGCGCCGTCTAATTCGACGGCGGCGGCGCCAAAGAACAGTGGATTTTTTGTGGCTCCTTCAAATGTTTTGGTGTATTCCGTTACAATTGTTGTTGGTGCTGTGTTGTTGCGTTACTGA 897 0.5173 MEFHHHDQKPLCLFLLLLTLLSSSQALKFNVGGSQGWVPNPSESYNNWASRNRFQINDTIVFKYKKGSDSVLEVNKEDYDKCNKTNPIKKFDNGDTEFKFDRSGPFYFISGKDGNCEKGQKLIVVVLSPRTPPTSSPPKTSPLPPSPKPNPPAPAPSSPPISPSPPVQPPSTSTPPASSPVPSGGSPVTSPSPSTLSPTASPAPATMSPTESPAPSTLSPGPTPATSAPPPFSSPLSPPPASGPNSPPPTGQGSSPPSQLAPSNSTAAAPKNSGFFVAPSNVLVYSVTIVVGAVLLRY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1172 298 Gene3D - 25 130 IPR008972 -
Aed5g1172 298 MobiDBLite consensus disorder prediction 256 271 - -
Aed5g1172 298 Pfam Plastocyanin-like domain 37 120 IPR003245 GO:0009055
Aed5g1172 298 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 8 296 - -
Aed5g1172 298 PANTHER BLUE COPPER PROTEIN 8 296 IPR039391 GO:0009055
Aed5g1172 298 SUPERFAMILY Cupredoxins 26 127 IPR008972 -
Aed5g1172 298 MobiDBLite consensus disorder prediction 183 214 - -
Aed5g1172 298 MobiDBLite consensus disorder prediction 131 182 - -
Aed5g1172 298 MobiDBLite consensus disorder prediction 128 273 - -
Aed5g1172 298 PRINTS Proline rich extensin signature 145 161 - -
Aed5g1172 298 PRINTS Proline rich extensin signature 182 207 - -
Aed5g1172 298 PRINTS Proline rich extensin signature 124 145 - -
Aed5g1172 298 PRINTS Proline rich extensin signature 162 179 - -
Aed5g1172 298 CDD OsENODL1_like 28 127 IPR041846 -
Aed5g1172 298 MobiDBLite consensus disorder prediction 215 255 - -
Aed5g1172 298 ProSiteProfiles Phytocyanin domain profile. 27 128 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1172 Aed-Chr5 10169519 10171134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1172 8 206 Phytocyanin Superfamily AT5G53870 50.739 1.80e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1172 - - gmx:100795901 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1172 5 10169519 10171134 Aed5g1172 5 10169519 10171134 ECH